Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00956 ATGGCAGAAGAAGAAGAAGAACGCAGGATCCTGGTGGCCGTGGATGAAGGCGAGGAGAGCATGTATGCTCTCTCATGGTGCCTCAAGAACCTTTCTTTTCAAAATTCCAAAGACACCCTTATTCTCCTATACGTCAAGCCCCCTCGAGTCACTTATTCAGCCTTCGATGGCACAGGATATTTTTTTGCCTCTGACATAACGGCTACCATGGAGAGGTATAGCCAACAAGTTGCCGATTGCGTCTTGGAGAAAGCCAAGAAATTGTGTAAAAATATTGAAAATGTGGAGACGAGGGTAGAGAATGGCGATACAAGGGATGTGATTTGTCAGATGGTTCAAAAGTTGGGTGCTGATGTCTTAGTCATGGGAAGCCATGGTTATGGTCTCATCAAGAGGGCTTTCCTTGGAAGCGTCAGCAATCACTGTGCACAGAACGTGAAGTGCCCGGTTTTGATTGTGAAGAAGCCAAAACCAACCGCCGGAGAAACATAA 492 0.4634 MAEEEEERRILVAVDEGEESMYALSWCLKNLSFQNSKDTLILLYVKPPRVTYSAFDGTGYFFASDITATMERYSQQVADCVLEKAKKLCKNIENVETRVENGDTRDVICQMVQKLGADVLVMGSHGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTAGET 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00956 163 PANTHER OS05G0357525 PROTEIN 3 160 - -
Gma20g00956 163 Pfam Universal stress protein family 8 154 IPR006016 -
Gma20g00956 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 156 - -
Gma20g00956 163 PRINTS Universal stress protein signature 7 25 IPR006015 -
Gma20g00956 163 PRINTS Universal stress protein signature 114 126 IPR006015 -
Gma20g00956 163 PRINTS Universal stress protein signature 132 154 IPR006015 -
Gma20g00956 163 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 160 - -
Gma20g00956 163 CDD USP_Like 9 153 - -
Gma20g00956 163 Gene3D HUPs 3 162 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00956 Gma-Chr20 36249797 36250657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00956 - - gmx:100813085 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01461 10 41714001 41715285 Gma20g00956 20 36249797 36250657 ECH
Gma20g00956 20 36249797 36250657 Gma20g00956 20 36249797 36250657 ECH
Gma10g01461 10 41714001 41715285 Gma20g00956 20 36249797 36250657 GST
Gma19g02170 19 50561748 50563182 Gma20g00956 20 36249797 36250657 PCT
Gma03g02137 03 46857632 46862706 Gma20g00956 20 36249797 36250657 PCT
Gma20g00956 20 36249797 36250657 Gma19g02170 19 50561748 50563182 PCT
Gma20g00956 20 36249797 36250657 Gma03g02137 03 46857632 46862706 PCT