Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01461 ATGGCAGAAGAACAACAACGACGGATCCTGGTGGCCGTGGATGAAGGCGAGGAGAGCATGTATGCTCTCTCATGGTGCCTTAAGAACCTTGCTTTTCAAAATTCCAAAGACACCCTTCTTCTTCTCTACGTCAAACCCCCTCGAGTCACTTATTCAGCCTTCGATGGCACAGGATATTTGTTTTCCTCTGACATAACGGCTACCATGGAGAGGTATAGCCAACAAGTGGCCGATTGCGTCTTGGAGAAAGCCAAGAAATTGTGTAACAATATTGAAAATGTAGAGACGAGGGTAGAGAATGGCGATCCAAGGGACGTGATTTGTCAGATGGTTCAAAAGTTGGGTGCTGATGTCTTAGTCATGGGAAGCCATGGTTATGGTCTCATCAAGAGGGCTTTCCTTGGAAGCGTCAGCAATCACTGTGCACAGAACGTGAAGTGCCCGGTTTTGATTGTTAAGAAGCCAAAACCAACCACCGGAGAAACATAA 489 0.4663 MAEEQQRRILVAVDEGEESMYALSWCLKNLAFQNSKDTLLLLYVKPPRVTYSAFDGTGYLFSSDITATMERYSQQVADCVLEKAKKLCNNIENVETRVENGDPRDVICQMVQKLGADVLVMGSHGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTTGET 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01461 162 Coils Coil 77 97 - -
Gma10g01461 162 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 158 - -
Gma10g01461 162 CDD USP_Like 8 152 - -
Gma10g01461 162 Pfam Universal stress protein family 7 153 IPR006016 -
Gma10g01461 162 Gene3D HUPs 2 161 IPR014729 -
Gma10g01461 162 PRINTS Universal stress protein signature 6 24 IPR006015 -
Gma10g01461 162 PRINTS Universal stress protein signature 113 125 IPR006015 -
Gma10g01461 162 PRINTS Universal stress protein signature 131 153 IPR006015 -
Gma10g01461 162 PANTHER OS05G0357525 PROTEIN 3 158 - -
Gma10g01461 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01461 Gma-Chr10 41714001 41715285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01461 - - gmx:100305594 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01461 10 41714001 41715285 Gma20g00956 20 36249797 36250657 ECH
Gma10g01461 10 41714001 41715285 Gma10g01461 10 41714001 41715285 ECH
Gma10g01461 10 41714001 41715285 Gma20g00956 20 36249797 36250657 GST
Gma19g02170 19 50561748 50563182 Gma10g01461 10 41714001 41715285 PCT
Gma03g02137 03 46857632 46862706 Gma10g01461 10 41714001 41715285 PCT
Gma10g01461 10 41714001 41715285 Gma19g02170 19 50561748 50563182 PCT
Gma10g01461 10 41714001 41715285 Gma03g02137 03 46857632 46862706 PCT