Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02170 ATGAGTGAAGCAACAACAAGAAACGAACGGCGGGTTCTGGTGGCGGTGGACGAAGGCGAGGAAAGCATGTACGCTCTTTCTTGGAGCCTCAAGAACATAATTTTCCAAAATTCCAGCGATACCCTTATCCTTCTTTACGTCAAGCCCCCTCATGCCGTTTATTCCCCCTTAGATTCCACAGCCAGGATAGATCATCCTGAAACTCCAGGATATTTGTTTTCGTCGGACGTAAGTGCGGCCATCGAGAAGTATGGCCAAGAAGTGGCAGATTGCGTGTTAGAGAAAGCAAAAAAATTGTGTAAAGATCTCCAAAACGTCAAGGTGGAAACCCGGGTAGAAATTGGAGACCCAAGGGACGTGATCTGTGACATGTCTCAAAAGTTGGGTGCTGACTTGTTAATCATGGGTAGCCACGGCTATGGAGTTGTAAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGCTCACAGAACGTGAAGTGCCCAATTTTGATAGTCAAGAAGCCAAAACCATCTGCTGGTGCTGGAAAATGA 534 0.4663 MSEATTRNERRVLVAVDEGEESMYALSWSLKNIIFQNSSDTLILLYVKPPHAVYSPLDSTARIDHPETPGYLFSSDVSAAIEKYGQEVADCVLEKAKKLCKDLQNVKVETRVEIGDPRDVICDMSQKLGADLLIMGSHGYGVVKRAFLGSVSNYCSQNVKCPILIVKKPKPSAGAGK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02170 177 Pfam Universal stress protein family 10 167 IPR006016 -
Gma19g02170 177 Coils Coil 93 113 - -
Gma19g02170 177 Gene3D HUPs 4 175 IPR014729 -
Gma19g02170 177 PRINTS Universal stress protein signature 9 27 IPR006015 -
Gma19g02170 177 PRINTS Universal stress protein signature 127 139 IPR006015 -
Gma19g02170 177 PRINTS Universal stress protein signature 145 167 IPR006015 -
Gma19g02170 177 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 169 - -
Gma19g02170 177 CDD USP_Like 11 166 - -
Gma19g02170 177 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 173 - -
Gma19g02170 177 PANTHER OS05G0357525 PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02170 Gma-Chr19 50561748 50563182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02170 - - gmx:100804158 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02170 19 50561748 50563182 Gma03g02137 03 46857632 46862706 ECH
Gma19g02170 19 50561748 50563182 Gma19g02170 19 50561748 50563182 ECH
Gma19g02170 19 50561748 50563182 Gma03g02137 03 46857632 46862706 GST
Gma19g02170 19 50561748 50563182 Gma10g01461 10 41714001 41715285 PCT
Gma19g02170 19 50561748 50563182 Gma20g00956 20 36249797 36250657 PCT
Gma10g01461 10 41714001 41715285 Gma19g02170 19 50561748 50563182 PCT
Gma20g00956 20 36249797 36250657 Gma19g02170 19 50561748 50563182 PCT