Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00943 ATGGGGTCTCTGGTTGCTGAAACAGCCATGAAGAAACCAATGTGGTTGTATCCAAAGGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGGCACTCAGCTTGCTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGCTGTTGTGGGGGGCTACATTTTGGAGATGTTCTGTGTTTGGACCTTGAAAAAATGAATTGGAGCAAACTTGCCACCACAGGTGAAAAGCCAGGCCCAAGAGATAGCCACAGTGCTGTTCTTGTAGGGCACAAAATGATAGTTTTTGGTGGCACAAATGGGTTGAAAAAGGTGAATGACACTCATATATTGGACCTTGTTACCAAAGAGTGGATTTGTCCAAAATGTGAAGGGACTCCTCCTTCTCCAAGGGAAAGTCACACAGCAACCCTAGTTGGTGATGAAAGACTAGTGATTTTTGGTGGCAGTGGAGAAGGTGATGCAAACTATTTGAATGATTTGCATGTTCTAGACCTTCGAACCATGAGGTGGACTTCTCCTGTGGTCAAAGGTGATTTGCCTGTGCCTAGGGACAGTCACAGTACTCTTGCAACTGGGAACAAGCTTATTGTTTATGGTGGAGACTGTGGTGATCAGTATCAGGGCGATGTTAATGTGCTTGATATGGATACAATGACTTGGTCAAGGTTGAAAATTCAAGGCTCTTCCCCAGGAGTCAGGGCAGGTCATGCGGCTGTGAGTATTGGAACCAAGGCAAATGAATATTTTCATGATTTACAGGTCTACATCATTGGAGGGGTTGGAGATAAACGTTATTATAATGACATATGGGTCTTCGATATCTGCACTTGTTCGTGGACTCAGCTTGATATTCGTGGTCAACAACCACAGGGTCGGTTTTCTCACACAGCTGTTGTAGCAGACATGGATGTTGCCATATATGGCGGGTGTGGGGAAGATGAACGTCCTTTGAACGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCAAATGGGCGTTACAACATTTCCATGTGCAAAGTTTTTGGAACTTGTTGGAACCATGAAAAGAGGACCATACACGGAGGAGCAGATACCAACTCGACAACTCCACGCAATGGGAATAATAATATGGAAGTCTTAGGTAAATGGTCTTACGAAGTTGTATCGGATAAAGTGAACCCTTGTCACTTTGATTCTGGCACTTCACAACAGAAGAGGAGGAGAATGGCTGTTGCAAAGGTGTGGGATGTTGATTCAGAACAAGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCATCTCAATCTGATCAAGAACAGACCCCAGGTCAAAAAGCAAATTTTCCTGTCATGGATTCTCAGAGGTATCATTGGTTCAAACAGATCAATAAAAGTCCAAGCTATTGCCAGCTTGACAATATCCCAAGTAATAACACAGTTTTGAAGAATATTACACAAAGAAGTGTTCATCTCATAGAAAATCAACCAAAAGATGAGCAGTATCTTCATGTTGATGAGGATCGAAAAGGAGCTCGACATACTCAACATCTGATTGGTGCTGAAGTTCGGGGGAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGCTGTGAATGGAAGAGTTTTCAGAGGAGTCTTATTTGCACCAGGAGCAGGAGTATTCTCTACATGTGTTGAGCCAAACTGTTCTCTATCATGTTCATTTCCCTCCACTCAACCATTTATGAACTCAAATCATGTGAGGGATTCCCAGCAAGTAACTAATTGTTCGCATGCAGAGCCCTGCCACGGCTTAAGGCAACCTGTGCTAGCTCAGCCAACACCAATCATGAGAGGCACTACTGCGTCTTTAGCCAAAGAGCATAAAATGAGGAGTGACCTTCAAGGGTTGGTTTTGACACTTGGAGGGCCTGCAAGTGGAAACCATGCTTGA 1920 0.4401 MGSLVAETAMKKPMWLYPKVLGFNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLEKMNWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTNGLKKVNDTHILDLVTKEWICPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHVLDLRTMRWTSPVVKGDLPVPRDSHSTLATGNKLIVYGGDCGDQYQGDVNVLDMDTMTWSRLKIQGSSPGVRAGHAAVSIGTKANEYFHDLQVYIIGGVGDKRYYNDIWVFDICTCSWTQLDIRGQQPQGRFSHTAVVADMDVAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTCWNHEKRTIHGGADTNSTTPRNGNNNMEVLGKWSYEVVSDKVNPCHFDSGTSQQKRRRMAVAKVWDVDSEQEEHSLSLSQHSSPSQSDQEQTPGQKANFPVMDSQRYHWFKQINKSPSYCQLDNIPSNNTVLKNITQRSVHLIENQPKDEQYLHVDEDRKGARHTQHLIGAEVRGKVDGAFDSGLLMTAAVNGRVFRGVLFAPGAGVFSTCVEPNCSLSCSFPSTQPFMNSNHVRDSQQVTNCSHAEPCHGLRQPVLAQPTPIMRGTTASLAKEHKMRSDLQGLVLTLGGPASGNHA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00943 639 SUPERFAMILY Kelch motif 19 242 IPR015915 GO:0005515
Gma20g00943 639 Pfam Galactose oxidase, central domain 231 287 - -
Gma20g00943 639 Pfam Galactose oxidase, central domain 87 135 - -
Gma20g00943 639 Pfam Galactose oxidase, central domain 139 188 - -
Gma20g00943 639 Pfam Galactose oxidase, central domain 37 85 - -
Gma20g00943 639 PANTHER OS01G0300900 PROTEIN 1 637 - -
Gma20g00943 639 SUPERFAMILY Kelch motif 252 339 IPR015915 GO:0005515
Gma20g00943 639 MobiDBLite consensus disorder prediction 418 440 - -
Gma20g00943 639 PANTHER KELCH REPEAT DOMAIN 1 637 - -
Gma20g00943 639 Gene3D - 14 120 IPR015915 GO:0005515
Gma20g00943 639 Gene3D - 121 384 IPR015915 GO:0005515
Gma20g00943 639 MobiDBLite consensus disorder prediction 404 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00943 Gma-Chr20 36018396 36022305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00943 15 423 Acyl Lipid Metabolism Gene Families AT3G05420 30.233 6.96e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00943 K20285 - gmx:100787222 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00943 20 36018396 36022305 Gma20g00943 20 36018396 36022305 ECH
Gma10g01449 10 41563975 41568401 Gma20g00943 20 36018396 36022305 GST
Gma19g02165 19 50516656 50521060 Gma20g00943 20 36018396 36022305 PCT
Gma20g00943 20 36018396 36022305 Gma19g02165 19 50516656 50521060 PCT