Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01449 ATGGGGTCTCTGGTTGCTGAAACAGCCATGAAGAAACCAATGTGGTTGTATCCAAAGGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGACACTCTGCTTGCTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGCTGTTGTGGGGGGCTACATTTCGGAGATGTTCTGTGTTTGGACCTTGAAAAAATGGATTGGAGCAAGCTTGCCACCACAGGTGAAAAGCCAGGCCCTAGAGATAGCCACAGTGCTGTTCTTGTAGGGCACAAAATGATAGTTTTTGGTGGCACAAATGGGTTGAAGAAGGTGAATGACACTCATATATTGGACCTTGTTACCAAGGAGTGGTTTCGTCCAAAATGTGAAGGGACTCCTCCTTCTCCAAGGGAAAGTCACACTGCAACCCTAGTTGGGGATGAAAGACTAGTGATTTTTGGTGGCAGTGGAGAAGGTGAGGCAAACTATTTGAATGATTTGCATGTTCTAGACCTTCGAACCATGAGGTGGACTTCTCCTACGGTCAAAGGTGATTTTCCTGTGCCTAGGGACAGTCACAGCACTCTTGCAATTGGGAACAAGCTTATTATGTATGGTGGAGACTGTGGTGATCAGTATCAGGGTGATGTTAATGTTCTTGACATGGATACGATGAGTTGGTCAAGGTTGAGAATTCAAGGTTCTTCCCCAGGAGTCAGGGCAGGCCATGCGGCTATGAAAATTTTCATGATTAATTTACAGATCTACATCATTGGAGGGGTAGGAGATAAACGTTATTATAATGACATATGGGTCTTTGATATCTGCACTTGTTCGTGGACTCAGCTTGATATTCGTGGTCAACAACCACAGGGTCGGTTTTCTCACACAGCTGTTGTTGCAGACATGGATATTGCCATATATGGCGGGTGTGGGGAAGATGAGCGTCCTTTGAACGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCAAATGGGCGTTACAACATTTCCATGTGCAAAGTTTTTGGAACTTGTTGGAACCATGAAAAGAGGACCATACCTGGAGGAGCAGATACCAACTCGACAACTCCACGCAATGGGAATAATAATATGGAAGTCTTGGGTAAATGGGCTTATGAAGTTGTATCGGATAAAGTGAACCCTTGTCACTTTGATTCTGGCACATCACAACAGAAGAGGAGGAGAATTGCTATTGCAAAGGTGTGGGATGTTGAATCAGAACAAGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCATCTCAATCTGATCAAGAACAGACCCCAGGTCAAAAATCAAATGTTTCTGTCATGGATGCTCAGAGTTATCATTGGTTCAAACAGATCAATAAAAGTCCAAGCTATTGCCAGCTTGACAATATCCCAAGTAATAACACAGCTTTGAAGAATATCACACAACGAAGTGTTCATCTCATAGAAAATCAACCAAAACAAGAACATTATCTTCATGTTGATGAGGATCGAAAAGGAGCTCGACATACTCAACACCTGATTGGTGCTGAAGTTCGGGGGAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGCTGTGAATGGAAGAGTTTTCAGAGGAGTATTATTTGCACCAGGAGCAGGAGTATTCTCCACAAGTGTTGAGCCAAAGTGTTCTGTATCATGTTCATTTCCCTCCACTCAACCATTTATGAACTCAAATCATCATGTGAGGGATTCTCAGCAAGTAGCAAATTGTTCGCGTGCAGAGCCCTGCCACGGCATAAGCCAACCTGTGCTAGCTCAGCCAACACCAATCATGAGAGGCACTACTGTGTCTTTAGCCAAAGAGCATAAAGTGAGGAGTGACCTTCAAGGGTTGGTTTTGACACTTGGAGGGCCTGCAAGTGGAAACCATGCTTGA 1905 0.442 MGSLVAETAMKKPMWLYPKVLGFNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTNGLKKVNDTHILDLVTKEWFRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLHVLDLRTMRWTSPTVKGDFPVPRDSHSTLAIGNKLIMYGGDCGDQYQGDVNVLDMDTMSWSRLRIQGSSPGVRAGHAAMKIFMINLQIYIIGGVGDKRYYNDIWVFDICTCSWTQLDIRGQQPQGRFSHTAVVADMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTCWNHEKRTIPGGADTNSTTPRNGNNNMEVLGKWAYEVVSDKVNPCHFDSGTSQQKRRRIAIAKVWDVESEQEEHSLSLSQHSSPSQSDQEQTPGQKSNVSVMDAQSYHWFKQINKSPSYCQLDNIPSNNTALKNITQRSVHLIENQPKQEHYLHVDEDRKGARHTQHLIGAEVRGKVDGAFDSGLLMTAAVNGRVFRGVLFAPGAGVFSTSVEPKCSVSCSFPSTQPFMNSNHHVRDSQQVANCSRAEPCHGISQPVLAQPTPIMRGTTVSLAKEHKVRSDLQGLVLTLGGPASGNHA 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01449 634 Pfam Galactose oxidase, central domain 139 189 - -
Gma10g01449 634 Pfam Galactose oxidase, central domain 37 85 - -
Gma10g01449 634 Pfam Galactose oxidase, central domain 87 135 - -
Gma10g01449 634 Gene3D - 13 119 IPR015915 GO:0005515
Gma10g01449 634 Gene3D - 120 376 IPR015915 GO:0005515
Gma10g01449 634 PANTHER OS01G0300900 PROTEIN 1 632 - -
Gma10g01449 634 SUPERFAMILY Kelch motif 19 236 IPR015915 GO:0005515
Gma10g01449 634 Pfam Galactose oxidase, central domain 231 281 - -
Gma10g01449 634 MobiDBLite consensus disorder prediction 408 436 - -
Gma10g01449 634 MobiDBLite consensus disorder prediction 412 436 - -
Gma10g01449 634 PANTHER KELCH REPEAT DOMAIN 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01449 Gma-Chr10 41563975 41568401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01449 15 417 Acyl Lipid Metabolism Gene Families AT3G05420 30.733 3.39e-38 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01449 K20285 - gmx:100801275 1267.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01449 10 41563975 41568401 Gma10g01449 10 41563975 41568401 ECH
Gma10g01449 10 41563975 41568401 Gma20g00943 20 36018396 36022305 GST
Gma19g02165 19 50516656 50521060 Gma10g01449 10 41563975 41568401 PCT
Gma10g01449 10 41563975 41568401 Gma19g02165 19 50516656 50521060 PCT