Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02165 ATGTTTTCACTACATCCATCGCTTGCTGTTGGTTGCCACAGTGATTTGGACTTGAAAGCGCCCATCTTTTCATGTCTATTGATATTGATTGTTGATGCATCACTTGGCTTGTTGATGTCCTCTTTGAATCAATCTCTCTTTCCATACGACTCTTCGTCCTTGACTGTTTCTTCATCTGTGTTCAACCCTTATGCTTTTTTAAGCAACCGTCAtcacactctcacactcacacttcacacttcacaACATAGAAGACAGATGAGTTCTTTGCTACCTCAAGTTGCCAAGAACAAAGCAATGTGGCTGAATCCCAAGGTTTTGGGTTTTAATCCTCCTGAAAGATGGGGCCACTCTGCTTGCTTCTCCAAGGGGCTTATGTATGTCTTTGGGGGTTGCTGTGGTGGACTGCATTTTTGCGATGTTCTGACTTTGGACCTTAACAAAATGGTTTGGAGCAAGCTTACTACCACAGGTGAAAAGCCGGGGCCTAGAGATAGCCATAGTGCTGTTCTTGTGGGGCATAAAATGATAGTGTTTGGTGGCACAAATGGCTTCAAGAAGGTTAATCACATTCATATACTTGATCTTGTTACCAAAGAGTGGGTTCGACCTGAGTGTAAAGGGAATCCTCCTTCTCCTCGTGAAAGCCATACTGCCACACTTGTTGGTGATGAAAGGATAGTGATATTTGGTGGAAGTGGAGAAGGTCATGCTAACTATTTAAACGATTTGCATATTCTTGATCTTCGAACCATGAGTTGGACTTCCCCTGAGTTGAAAGGTGATTTGCCTATCCCTAGGGACAGTCATAGTACACTTGCAATTGGGAACAAGCTTATTGTGTATGGTGGAGACTCCGGTGATCAGTATCATGGCAATGTTCATATGCTTGATATGACAACAATGACTTGGTCTAAATTGTCAATTCAAGGTTCTCCACCAGGAGTCAGGGCAGGTCATGCTGCAGTGAACATTGGAACCAAGGTCTATATCATTGGAGGAGTTGGAGATAAACGTTACTATAATGACGTTTGGATCTTTGATATATGCAATTTTTCATGGACTCAACTTGATATACGTTTTCACCAGCCACAAGGGCGATTTTCTCATACAGCTGTTGCTGCTGGCATGGATATTGCAATATATGGCGGGTGTGGTGAAGATGAACGTCCTCTCAATGAATTGTTAGTGTTGCAGGTTGGAGCAGAGCATTTAAATGGAGTTTACTACATTCCCATGTGCAAACCTTTTGGAACTTATTGGAATCAAGAAAAGAAGATTATCCCAGGAGAAGCAGATGCCAACTCGAAAACTTTACTCGTGAGGAATAACGTGGAAGCTTTTGGCAAAGGAGCTTATGAAGTTGCATCAGAAAAATTGCCACCTTATCACTTTGATTCAGATACTTCACGACAGAAGAGGAGGAGAATTGCTGCTGCAAAGGTGTGCGATGTTGAATCAGAACAAGAAGAAAACTTTCTTACATTGTCCCTTCATTCATTTCCATGTCAATCCGATCAAGAACAGACCCCAAGTCAAAAAGCAAAGACATTGTTTCCATCCACTTGCCAATACAACAATGGCTCAAATTATAAGAGAACTTTGAAGAATGTTCATTTCCTACAACATCAACTAAAACAAGAACATTGCCTTTATGTTCGTGAGGATAGAAAAAGAGCTCAACTTCAGGCTGCAGAGCAGAAATCCATGGGGCGAGGACCAATTCAACACCTGATTGGTGCTGAAGTTCGGGGGAGAGTTGATGGACCCTTTGACTCAGTTTCGCTCTCTCCTGCAGCTGTGAATGGAAGGATTTTCAGGGGGGTCATATTTTCACCTGGAGCAGCAGGAGTTGTCTCAAAAGGGGGCAGTGTCGAACCAAAGTGTTCTCTAACAAGTTCTTTTCCTTTTTCCTCTCAAGCATATTTGAACTCCAATCATGTGGGTAATTTAACGGCTTCCCAACAAGCACCTATTCGTTTGCATGCAGAGCCATGCCATGGTTCATGGCAAACGCCAGTGGCATTACCATTTCCAATCATTCGAGGCACTCCAAGTGTTGTTTCCAAGGAGAATAAAATCAATAGTGACCTTCAAGGGTTGGTTTTAACCCTCGGAGGACCTGCTAGTGGACACCCTCAGGTAAAACATTGA 2154 0.4215 MFSLHPSLAVGCHSDLDLKAPIFSCLLILIVDASLGLLMSSLNQSLFPYDSSSLTVSSSVFNPYAFLSNRHHTLTLTLHTSQHRRQMSSLLPQVAKNKAMWLNPKVLGFNPPERWGHSACFSKGLMYVFGGCCGGLHFCDVLTLDLNKMVWSKLTTTGEKPGPRDSHSAVLVGHKMIVFGGTNGFKKVNHIHILDLVTKEWVRPECKGNPPSPRESHTATLVGDERIVIFGGSGEGHANYLNDLHILDLRTMSWTSPELKGDLPIPRDSHSTLAIGNKLIVYGGDSGDQYHGNVHMLDMTTMTWSKLSIQGSPPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDVWIFDICNFSWTQLDIRFHQPQGRFSHTAVAAGMDIAIYGGCGEDERPLNELLVLQVGAEHLNGVYYIPMCKPFGTYWNQEKKIIPGEADANSKTLLVRNNVEAFGKGAYEVASEKLPPYHFDSDTSRQKRRRIAAAKVCDVESEQEENFLTLSLHSFPCQSDQEQTPSQKAKTLFPSTCQYNNGSNYKRTLKNVHFLQHQLKQEHCLYVREDRKRAQLQAAEQKSMGRGPIQHLIGAEVRGRVDGPFDSVSLSPAAVNGRIFRGVIFSPGAAGVVSKGGSVEPKCSLTSSFPFSSQAYLNSNHVGNLTASQQAPIRLHAEPCHGSWQTPVALPFPIIRGTPSVVSKENKINSDLQGLVLTLGGPASGHPQVKH 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02165 717 PANTHER OS01G0300900 PROTEIN 87 711 - -
Gma19g02165 717 SUPERFAMILY Kelch motif 157 401 IPR015915 GO:0005515
Gma19g02165 717 PANTHER KELCH REPEAT DOMAIN 87 711 - -
Gma19g02165 717 Pfam Kelch motif 214 267 - -
Gma19g02165 717 Gene3D - 94 205 IPR015915 GO:0005515
Gma19g02165 717 Pfam Galactose oxidase, central domain 125 171 - -
Gma19g02165 717 Pfam Kelch motif 317 357 IPR006652 GO:0005515
Gma19g02165 717 Gene3D - 206 428 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02165 Gma-Chr19 50516656 50521060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02165 101 570 Acyl Lipid Metabolism Gene Families AT3G05420 28.169 1.43e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02165 K20285 - gmx:100796366 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02165 19 50516656 50521060 Gma19g02165 19 50516656 50521060 ECH
Gma19g02165 19 50516656 50521060 Gma10g01449 10 41563975 41568401 PCT
Gma19g02165 19 50516656 50521060 Gma20g00943 20 36018396 36022305 PCT
Gma10g01449 10 41563975 41568401 Gma19g02165 19 50516656 50521060 PCT
Gma20g00943 20 36018396 36022305 Gma19g02165 19 50516656 50521060 PCT