Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00926 ATGGCTCCTAATATCACCACCGTCACCGACGCTCAAGCCAAGGCCGCCGGCGGGCGTGGCCGTGCCTACGTCACCTTCCTCGCCGGAAACGGTGACTATGTGAAAGGTGTCGTTGGCTTGGCCAAAGGTCTGAGGAAGGTGAAAAGCATGTACCCTCTGGTGGTTGCAGTGTTACCCGATGTTCCAGAACATCACCGAAACATTCTCACCTCCCAAGGTTGCATTGTTAGAGAAATTGAACCCGTGTACCCTCCTGAGAATCAGACGCAGTTCGCCATGGCATATTACGTCATCAACTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTTCAGCAAGATGATATACCTAGACGGTGATATACAAGTGTTTGACAATATTGACCACTTGTTTGACTTGCCTGATAACTACTTTTATGCGGTGATGGACTGTTTTTGTGAGCCCACTTGGGGCCACACTCTGCAGTATCAAATCGGATACTGCCAGCAGTGCCCTCATAAGGTTCAGTGGCCCACTCACTTTGGGCCCAAGCCTCCTCTCTATTTCAATGCTGGCATGTTTGTTTATGAGCCCAATCTGGATACCTACCGTGACCTCCTTCAAACTGTCCAAGTCACTAAGCCCACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGACAAATATAGGCCAATTCCTAATGTCTATAATCTTGTGTTGGCCATGCTGTGGCGTCACCCTGAGAACGTTGAGCTTGAAAAAGTTAAAGTGGTTCACTACTGTGCTGCTGGATCTAAGCCTTGGAGGTACACAGGGAAGGAGGAAAATATGGAGAGAGAAGATATCAAGATGTTGGTGAAGAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTACAACAATCCATTCAACGTGGATAGGTTCACTGCGGCACTTTTGGAGGTTGGTGAAGTCAACCACCGCCGGGCTCCACTCCGCTCATTGAGGATTTCAATCTCACTCTATGTTCCGGCCACCGCTGCCTCCTCGCCGGTTCCAACGGCGCCGACCACTATCCTCAAGATATTAGGAGGGAAGCACTTGGTGGAGCCTGACATGGTTCGCGTGCTCGGAAGACCAGCTTTTCACGACACCACTCTAATATCTTCTGGTCATCTCTGTTACCTTGGTGGCGAGTGGAGGCAAGATGTTGCTTTTGCGGGTTTTGAGGTTCCAATACAAATGGACATATCTGCTCAAAAAATGATATTTGGTGTGCCTGGGATTGATCCTCAAAGAAGAGACGAGCTAATCAAGGTATTAGATATCGATCTTTCCTGGAGATTGCATAAAGTATCTGATGGACAAAGACGAAGGGTGCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTCGATGAGATAACGGTTGACCTTGATGTCCTAGCAAGAGCTGACCTTCTGAGATTTCTAAGAAAGGAATGTGACGAGATGGGTGCCACTATTATCTATGCAACACATATATTTGATGGTCTTGAGGATTGGCCAACAAATATTGTTTATTCAGAAATTAGCAAATTGTCACTAATGAGAACAGTAGAAAGTTGGCTGCGGAAAGAACGAGATGAAGATAGAAAGAAAAGGAAAGAGAGAAAAGCAGCTGGTCTTCCTGAATTTGGAAAGCAAGTTGTGGGAAGCCATGTAACAGGGGATCCAGCGCGTGCTGCAGTTCAAGTAATTAATAATGGTTGGGCTGCAGGACGATTAAATTCCACCATTGCTGGCGAGGAAAACTTTCTCCTGAGCTCAAACCGAGTATTGAGGCAGTAG 1809 0.4649 MAPNITTVTDAQAKAAGGRGRAYVTFLAGNGDYVKGVVGLAKGLRKVKSMYPLVVAVLPDVPEHHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEFSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWGHTLQYQIGYCQQCPHKVQWPTHFGPKPPLYFNAGMFVYEPNLDTYRDLLQTVQVTKPTSFAEQDFLNMYFKDKYRPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDETLDYNNPFNVDRFTAALLEVGEVNHRRAPLRSLRISISLYVPATAASSPVPTAPTTILKILGGKHLVEPDMVRVLGRPAFHDTTLISSGHLCYLGGEWRQDVAFAGFEVPIQMDISAQKMIFGVPGIDPQRRDELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECDEMGATIIYATHIFDGLEDWPTNIVYSEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKQVVGSHVTGDPARAAVQVINNGWAAGRLNSTIAGEENFLLSSNRVLRQ 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00926 602 PANTHER GALACTINOL SYNTHASE 2 1 320 IPR030515 GO:0006012|GO:0047216
Gma20g00926 602 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 20 297 IPR029044 -
Gma20g00926 602 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 294 IPR029044 -
Gma20g00926 602 CDD ABC_ATPase 443 513 - -
Gma20g00926 602 Pfam Glycosyl transferase family 8 25 267 IPR002495 GO:0016757
Gma20g00926 602 CDD GT8_Glycogenin 21 291 - -
Gma20g00926 602 Gene3D - 347 552 IPR027417 -
Gma20g00926 602 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 294 542 IPR003439 GO:0005524
Gma20g00926 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 525 IPR027417 -
Gma20g00926 602 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00926 Gma-Chr20 35814301 35822122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00926 1 321 Glycosyltransferase AT1G56600 74.096 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00926 K18819 - gmx:100804007 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00926 20 35814301 35822122 Gma20g00926 20 35814301 35822122 ECH
Gma10g01433 10 41415879 41417832 Gma20g00926 20 35814301 35822122 GST
Gma03g02119 03 46721486 46724622 Gma20g00926 20 35814301 35822122 PCT
Gma20g00926 20 35814301 35822122 Gma03g02119 03 46721486 46724622 PCT