Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01433 ATGGCTCCTAATATCACCACTGTCAAAACCACCATCACCGACGCTCAAGCCAAGGTCGCCACCGATCATGGTCGTGCCTACGTCACCTTCCTCGCCGGAAACGGTGACTATGTGAAAGGTGTCGTTGGCTTGGCAAAAGGTCTGAGAAAAGTGAAGAGCATGTACCCTCTGGTGGTTGCAGTGCTACCCGATGTTCCCCAAGATCACCGCAACATTCTCACCTCCCAAGGTTGCATTGTTAGAGAGATTGAGCCCGTGTACCCCCCAGAGAATCAAACCCAGTTTGCCATGGCATATTACGTCATCAACTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGACGGTGATATCCAAGTTTTTGACAACATTGACCACTTGTTTGACTTGCCTGATAACTACTTCTATGCGGTGATGGACTGTTTCTGTGAGCCAACTTGGGGCCACACTAAACAATATCAGATCGGTTACTGCCAGCAGTGCCCCCATAAGGTTCAGTGGCCCACTCACTTTGGGCCCAAACCTCCTCTCTATTTCAATGCTGGCATGTTTGTGTATGAGCCCAATTTGGCTACTTACCGTGACCTCCTTCAAACAGTCCAAGTCACCCAGCCCACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGACAAATATAGGCCAATTCCTAATGTCTACAATCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAACGTTGAGCTTGACAAAGTTAAAGTGGTTCACTACTGTGCTGCTGGGTCTAAGCCTTGGAGGTACACTGGGAAGGAGGAGAATATGGAGAGAGAAGATATCAAGATGTTAGTGAAAAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTACAACAATCCACTCAATGTGGATAAGTTCACTGCGGCACTTATGGAGGTTGGTGAAGTCAAGTTCGTCCGTGCCCCATCTGCTGCTTAA 987 0.4752 MAPNITTVKTTITDAQAKVATDHGRAYVTFLAGNGDYVKGVVGLAKGLRKVKSMYPLVVAVLPDVPQDHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWGHTKQYQIGYCQQCPHKVQWPTHFGPKPPLYFNAGMFVYEPNLATYRDLLQTVQVTQPTSFAEQDFLNMYFKDKYRPIPNVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDETLDYNNPLNVDKFTAALMEVGEVKFVRAPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01433 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
Gma10g01433 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 328 - -
Gma10g01433 328 PANTHER GALACTINOL SYNTHASE 2 1 328 IPR030515 GO:0006012|GO:0047216
Gma10g01433 328 CDD GT8_Glycogenin 25 295 - -
Gma10g01433 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Gma10g01433 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 301 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01433 Gma-Chr10 41415879 41417832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01433 1 328 Glycosyltransferase AT1G56600 74.260 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01433 K18819 - gmx:548050 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01433 10 41415879 41417832 Gma10g01433 10 41415879 41417832 ECH
Gma10g01433 10 41415879 41417832 Gma20g00926 20 35814301 35822122 GST
Gma03g02119 03 46721486 46724622 Gma10g01433 10 41415879 41417832 PCT
Gma10g01433 10 41415879 41417832 Gma03g02119 03 46721486 46724622 PCT