Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02119 ATGGCACCTAACATCACCACCGTTGTTGCCAATGCCACCACTGAGCAATTACCCAAAGCTCATGGAGGAAGTAGTGGGCGTGCCTTTGTGACTTTTCTTGCTGGAAACGGTGATTATGTAAAGGGTGTTGTGGGTTTGGCCAAAGGACTGAGAAAGGCCAAAAGCATGTACCCTTTGGTGGTTGCTGTGTTACCAGATGTTCCTGAAGAACATCGTGCGATTCTCAAATCCCAAGGTTGCATTGTCAGGGAGATTGAACCTGTGTACCCTCCTAAGAACCAGACCCAGTTCGCCATGGCCTATTATGTCATCAATTACTCCAAGCTACGTATTTGGGAGTTCGTGGAGTACCAGAAGATGATATACCTAGACGGCGACATCCAAGTTTTTGGAAACATTGACCACTTGTTTGATCTTCCTAATAATTATTTCTATGCGGTGATGGATTGTTTCTGCGAGAAGACTTGGAGCCACACCCCTCAGTTCCAGATTGGGTACTGCCAACAGTGCCCTGATAAGGTTCAATGGCCCTCTCACTTTGGTACCAAACCTCCTCTATATTTCAATGCTGGCATGTTTGTTTATGAGCCTAATCTCAACACCTACCGTCATCTTCTCCAAACTGTCCAAGTCATCAAGCCCACGTCCTTTGCTGAGCAGGACTTTCTGAACATGTACTTCAAGGACAAGTACAAGCCAATACCGAACGTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCTGAGAATGTTGAACTTGATAAAGTTCAAGTGGTTCATTACTGTGCTGCTGGGTCTAAGCCTTGGAGGTTCACTGGGAAGGAAGAGAACATGGATAGGGAAGATATCAAGATGCTTATGAAGAAGTGGTGGGACATATATGAAGATGAGACACTGGACTACAATAACAACTCTGTCAATGTGGAACGTTTCACATCAGTACTATTGGATGCTGGGGGTTTTCAGTTTGTGCCAGCACCTTCTGCTGCCTAA 996 0.4588 MAPNITTVVANATTEQLPKAHGGSSGRAFVTFLAGNGDYVKGVVGLAKGLRKAKSMYPLVVAVLPDVPEEHRAILKSQGCIVREIEPVYPPKNQTQFAMAYYVINYSKLRIWEFVEYQKMIYLDGDIQVFGNIDHLFDLPNNYFYAVMDCFCEKTWSHTPQFQIGYCQQCPDKVQWPSHFGTKPPLYFNAGMFVYEPNLNTYRHLLQTVQVIKPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRFTGKEENMDREDIKMLMKKWWDIYEDETLDYNNNSVNVERFTSVLLDAGGFQFVPAPSAA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02119 331 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 25 301 IPR029044 -
Gma03g02119 331 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 331 - -
Gma03g02119 331 PANTHER GALACTINOL SYNTHASE 2 1 331 IPR030515 GO:0006012|GO:0047216
Gma03g02119 331 SUPERFAMILY Nucleotide-diphospho-sugar transferases 30 299 IPR029044 -
Gma03g02119 331 CDD GT8_Glycogenin 27 297 - -
Gma03g02119 331 Pfam Glycosyl transferase family 8 31 272 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02119 Gma-Chr3 46721486 46724622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02119 1 331 Glycosyltransferase AT1G56600 74.706 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02119 K18819 - gmx:100792129 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02119 03 46721486 46724622 Gma03g02119 03 46721486 46724622 ECH
Gma03g02119 03 46721486 46724622 Gma10g01433 10 41415879 41417832 PCT
Gma03g02119 03 46721486 46724622 Gma20g00926 20 35814301 35822122 PCT
Gma10g01433 10 41415879 41417832 Gma03g02119 03 46721486 46724622 PCT
Gma20g00926 20 35814301 35822122 Gma03g02119 03 46721486 46724622 PCT