Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02343 ATGGAGAGCGTGGCATCCCCGATGATAACTTGTTCAAGCAACAACAACAATGGAAGTGGTAGTAATAATACTACTACTCCTAGCAGGTATGAGAACCAAAAGCGGCGAGACTGGAACACGTTCTGCCAGTACCTGCGGAACCAGCGGCCACCGCTATCGCTGGCGCTGTGCAGCGGGGCGCACGTGCTGGAATTCCTGCAGTACCTTGACCAATTCGGGAAGACAAAAGTGCACAACCCACCATGCCCCTTCTTTGGCCTCCCCAACCCTCCGGCGCCCTGCCCCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAAAACGGCGGCAGACCCGAAACCAACCCCTTCGGCGCACGCGCCGTCAGGCTCTACTTGCATGATGTTCGTGATTTTCAGGCCAAGGCCAGAGGAGTTAGCTACGAGAAGAAGAGAAAGAGGCCAAAACAACAAAACATTGCAAATGCAGCAACTAGTGTTACCACTTCCCCTAATAATGCCAATGCCACTGCCACTTAA 552 0.567 MESVASPMITCSSNNNNGSGSNNTTTPSRYENQKRRDWNTFCQYLRNQRPPLSLALCSGAHVLEFLQYLDQFGKTKVHNPPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRLYLHDVRDFQAKARGVSYEKKRKRPKQQNIANAATSVTTSPNNANATAT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02343 183 PANTHER PROTEIN G1-LIKE2 6 164 IPR040222 -
Gma19g02343 183 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 6 164 - -
Gma19g02343 183 ProSiteProfiles ALOG domain profile. 29 156 IPR006936 -
Gma19g02343 183 MobiDBLite consensus disorder prediction 162 183 - -
Gma19g02343 183 MobiDBLite consensus disorder prediction 149 183 - -
Gma19g02343 183 MobiDBLite consensus disorder prediction 1 32 - -
Gma19g02343 183 Pfam ALOG domain 23 142 IPR006936 -
Gma19g02343 183 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02343 Gma-Chr19 52028200 52028751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02343 - - gmx:100786135 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00352 10 3356845 3357895 Gma19g02343 19 52028200 52028751 ECH
Gma03g01510 03 41317627 41318507 Gma19g02343 19 52028200 52028751 ECH
Gma19g01564 19 45003590 45004481 Gma19g02343 19 52028200 52028751 ECH
Gma20g01953 20 46810999 46812270 Gma19g02343 19 52028200 52028751 ECH
Gma10g01764 10 44855357 44857044 Gma19g02343 19 52028200 52028751 ECH
Gma19g02343 19 52028200 52028751 Gma19g02343 19 52028200 52028751 ECH
Gma19g02343 19 52028200 52028751 Gma03g02306 03 48257972 48258526 GST
Gma19g02343 19 52028200 52028751 Gma10g00352 10 3356845 3357895 PCT
Gma19g02343 19 52028200 52028751 Gma13g01048 13 24614665 24615610 PCT