Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma19g01564 | ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCTGACAACACCTGCAATCTCATCACCAATAGCACCACCACCAACTTAACCGCAGCTAGTGCTGCCTCTTCCTCTCCTGCTTCCACCTCCATCACCAGCAGCAGCCGCTACGAGAACCAGAAGCGCCGTGACTGGAACACCTTCGGTCAATACCTCAAGAACCACCGTCCCCCTCTCTCCCTCTCCAGGTGCAGCGGTGCACACGTCCTTGAATTTCTAAGGTACCTGGATCAATTTGGGAAGACCAAAGTGCACACACCGATCTGCCCCTTTTACGGGCACCCGAACCCTCCGGCGCCATGTCCATGTCCTCTTAGGCAAGCTTGGGGGAGCCTTGACGCACTCATAGGGCGTTTGCGTGCAGCTTTTGAGGAGAATGGAGGGAAGCCTGAGGCAAACCCTTTTGGAGCACGAGCTGTGAGACTCTACCTTCGTGAGGTTCGTGATCTGCAGTCCAAAGCCAGAGGAATTAGCTATGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAACCCATGCCAATACCCCATCACCCTCTTCCTCCTCCAGGTGCAAGTGCAACTCATTAG | 612 | 0.5294 | MDSNIQDFIDTCNSDNTCNLITNSTTTNLTAASAASSSPASTSITSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPIPHHPLPPPGASATH | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma19g01564 | 203 | MobiDBLite | consensus disorder prediction | 167 | 203 | - | - | |
| Gma19g01564 | 203 | PANTHER | G1-LIKE PROTEIN | 1 | 189 | - | - | |
| Gma19g01564 | 203 | MobiDBLite | consensus disorder prediction | 32 | 49 | - | - | |
| Gma19g01564 | 203 | MobiDBLite | consensus disorder prediction | 182 | 197 | - | - | |
| Gma19g01564 | 203 | PANTHER | PROTEIN G1-LIKE2 | 1 | 189 | IPR040222 | - | |
| Gma19g01564 | 203 | ProSiteProfiles | ALOG domain profile. | 49 | 176 | IPR006936 | - | |
| Gma19g01564 | 203 | Pfam | ALOG domain | 45 | 162 | IPR006936 | - | |
| Gma19g01564 | 203 | MobiDBLite | consensus disorder prediction | 32 | 52 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma19g01564 | Gma-Chr19 | 45003590 | 45004481 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma19g01564 | - | - | gmx:100527164 | 339.347 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma19g01564 | 19 | 45003590 | 45004481 | Gma19g02343 | 19 | 52028200 | 52028751 | ECH | |
| Gma19g01564 | 19 | 45003590 | 45004481 | Gma10g01631 | 10 | 43443597 | 43444193 | ECH | |
| Gma19g01564 | 19 | 45003590 | 45004481 | Gma19g01564 | 19 | 45003590 | 45004481 | ECH | |
| Gma03g01510 | 03 | 41317627 | 41318507 | Gma19g01564 | 19 | 45003590 | 45004481 | ECH | |
| Gma20g01953 | 20 | 46810999 | 46812270 | Gma19g01564 | 19 | 45003590 | 45004481 | ECH | |
| Gma10g01764 | 10 | 44855357 | 44857044 | Gma19g01564 | 19 | 45003590 | 45004481 | ECH | |
| Gma19g01564 | 19 | 45003590 | 45004481 | Gma03g01510 | 03 | 41317627 | 41318507 | GST | |
| Gma10g00352 | 10 | 3356845 | 3357895 | Gma19g01564 | 19 | 45003590 | 45004481 | PCT | |
| Gma13g01048 | 13 | 24614665 | 24615610 | Gma19g01564 | 19 | 45003590 | 45004481 | PCT |