Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01048 atggattcaattcaagaatttatggagtcgtgtaaCACTGACATCACCACCACCGCAACAACCACCATGAACACCTCCAGCAACAGCTTGGTTGCTAGCTCCAATTCCCCTTCGGCTTCCTCCACCACCAGCAGCCGCTACGAGAACCAAAAGCGCCGTGACTGGAACACCTTTGGCCAGTATCTCAAGAATCACCGACCCCCTCTCTCCCTCTCCAGGTGCAGCGGTGCAAACGTCCTTGAATTCCTTAGGTACTTGGACCAATTTGGCAAGACCAAAGTGCACACTCCGATCTGTCCCTTTTATGGGCACCCAAACCCTCCAGCACCATGTCCATGCCCTCTAAGACAAGCCTGGGGTAGCCTTGACGCCCTCATAGGTCGTCTAAGGGCAGCTTTTGAAGAAAACGGAGGAAAACCTGAAACCAACCCTTTTGGAGCAAGAGCTGTGAGGCTCTACCTTCGTGAGGTTCGTGAACTTCAGTCCAAAGCAAGAGGAATCAGTTACGAGAAGAAGAAACGAAAGCGTccaccaccaccaccaccaccaccaccacAACAACAACAATCATTGCCTCTACCTCATCACCACCGCCACCTCCACCACCACCTCCCTCCCCCAGGTGCAACTCAATGA 636 0.478 MDSIQEFMESCNTDITTTATTTMNTSSNSLVASSNSPSASSTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGANVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRELQSKARGISYEKKKRKRPPPPPPPPPQQQQSLPLPHHHRHLHHHLPPPGATQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01048 211 PANTHER G1-LIKE PROTEIN 1 211 - -
Gma13g01048 211 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Gma13g01048 211 Pfam ALOG domain 39 159 IPR006936 -
Gma13g01048 211 MobiDBLite consensus disorder prediction 164 211 - -
Gma13g01048 211 MobiDBLite consensus disorder prediction 26 50 - -
Gma13g01048 211 MobiDBLite consensus disorder prediction 26 46 - -
Gma13g01048 211 PANTHER PROTEIN G1-LIKE2 1 211 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01048 Gma-Chr13 24614665 24615610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01048 - - gmx:100527409 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00352 10 3356845 3357895 Gma13g01048 13 24614665 24615610 GST
Gma19g02343 19 52028200 52028751 Gma13g01048 13 24614665 24615610 PCT
Gma03g02306 03 48257972 48258526 Gma13g01048 13 24614665 24615610 PCT
Gma13g01048 13 24614665 24615610 Gma19g01564 19 45003590 45004481 PCT
Gma13g01048 13 24614665 24615610 Gma03g01510 03 41317627 41318507 PCT