Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01977 ATGGGAGTGGTAACTGTTGGTGAATTGAAGCCCAGCATTTCAGGAAAAAGGACATTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGCCAATATCTGACGTCTCTAGTGATCTTACCATCGAAGTAGGAGCATCAACCTTCGCACTTCACAAGTTTCCTTTGGTTTCTCGGAGTGGGAGAATTCGGAAGCTGCTGTTAGATGCAAAAGATTCAAAAGTTTTACGCATAAGTCTCCCAAATGTGCCAGGTGGTCCTGAAGGATTTGAACTAGCTTCCAAATTTTGCTATGGAATCAATGTTGAGTTCACACTCTCAAATGTGGCTTTGCTACGTTGCACGGCCCATTTTCTTGAAATGACCGAAGAGTTCGCAGAAAAAAACTTAGAGGCCAGAGCTGAAGCATATCTAAGAGACACAGTGCTCCCTAACATATCAAGCACCGTTTATGTTCTTCACTGTTGTGAGGCTCTTCGTCCCATATCAGAAGAAATAAACCTTGTCAATAAGCTAATCAACGCAATTGCGAACAACGCGTGCAAAGAGCAGCTTACAACTGGTTTACTAAAACTAGATCACACTTTCCCTTCTAAAACCACACCAACCATGGAACCAGAAACATCCTCAGATTGGTGGGGGAAGTCTTTCAATGTTCTTAGTCTTGAGTTCTTCCAACGAGTTGTGTCTGTTGTGAAGTCAAAGGGACTAAAACAAGACATGATCAGCAAGATTTTGATAAACTATGCACACGGTTCTCTTCAGGGGATTCGTGTTAGAGACCCCCAAGTGGTGAAGGGAAGTCTTCATGACTTGGAATTGCAAAAGAAACAAAGGGTGGTTGTTGAAACCATAGTTAGCTTACTCCCAACTCACTCAAGGAAAAGCCCGGTTCCAATGGGATTCCTCTCAAGTTTGTTGAAGGCTGCAATAGCAGCATCTGCATCAACTCCTTGCAAATCTGATTTGGAGAGGCGAATTAGTCTACAACTTGACCAGGCAATTCTTGAAGACATCTTAATCCCAACAAACTCACCTCAAAACTCCCACAACACAATGTATGACACAGACTTAATTCTGAGGATCTTTTCTATTTATCTTAACACGGACGAGGAGGATGGCGAAGATAGCGATAACTACATTGATGAAAGCCAAATGGCGTATGATTTTGACAGTCCTGGATCTCCTAAACAAAGCTCAATCATAAAGGTATCCAAATTGCTGGACAGTTATCTCGCTGAAGTAGCACTAGACTCAAACTTGTTGCCGTCAAAATTCACAGCACTTGCAGAACTGCTTCCAGATCATGCACGTATCGTTAGTGATGGACTCTATAGAGCTGTTGACATCTTCCTTAAGGTTCATCCAAACATGAAGGACTCAGAGAGGTACCGGTTATGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCAAGCAGCCATGCAGCACAGAATGAAAGACTACCGGTGCAGACGGTGGTTCAAGTTCTTTACTTGGAGCAAATGAGGCTTCGAAATGCCATGAATGGAGGGCACAACCAAGTCTTCTTTGGTCAGTTCCCTCACCGTTCAGGAAGCGGTGCAGGGAGTGGAGCCATTTCCCCAAGAGATAACTATGCATCGGTTAGAAGAGAGAACAGAGAGCTGAAGCTTGAAGTAGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCACGTGTCCATGAAGCAGGAGCTTGTTAAGTCACACCCTGCCAACAAGTTGTTCAAATCATTTACCAGAAAGCTGAGCAAGCTAAATTCTCTATTCAGGATAAACAGCATTAAGCCAATTGGTGGCAAAGCTAGTTCAGAAACTCGCTTCCCTTTTCCAAAGCGAAGACGCCACTCCGTTTCATGA 1887 0.4356 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASTFALHKFPLVSRSGRIRKLLLDAKDSKVLRISLPNVPGGPEGFELASKFCYGINVEFTLSNVALLRCTAHFLEMTEEFAEKNLEARAEAYLRDTVLPNISSTVYVLHCCEALRPISEEINLVNKLINAIANNACKEQLTTGLLKLDHTFPSKTTPTMEPETSSDWWGKSFNVLSLEFFQRVVSVVKSKGLKQDMISKILINYAHGSLQGIRVRDPQVVKGSLHDLELQKKQRVVVETIVSLLPTHSRKSPVPMGFLSSLLKAAIAASASTPCKSDLERRISLQLDQAILEDILIPTNSPQNSHNTMYDTDLILRIFSIYLNTDEEDGEDSDNYIDESQMAYDFDSPGSPKQSSIIKVSKLLDSYLAEVALDSNLLPSKFTALAELLPDHARIVSDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCQKLSQEASSHAAQNERLPVQTVVQVLYLEQMRLRNAMNGGHNQVFFGQFPHRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTRKLSKLNSLFRINSIKPIGGKASSETRFPFPKRRRHSVS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01977 628 Pfam NPH3 family 211 480 IPR027356 -
Gma19g01977 628 Gene3D Potassium Channel Kv1.1; Chain A 26 142 IPR011333 -
Gma19g01977 628 Coils Coil 540 574 - -
Gma19g01977 628 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 621 - -
Gma19g01977 628 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Gma19g01977 628 SUPERFAMILY POZ domain 22 123 IPR011333 -
Gma19g01977 628 PANTHER OS12G0117600 PROTEIN 25 621 IPR043454 -
Gma19g01977 628 ProSiteProfiles NPH3 domain profile. 211 504 IPR027356 -
Gma19g01977 628 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01977 Gma-Chr19 48834662 48838700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01977 1 454 EF-hand Containing Proteins AT2G47860 59.213 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01977 - - gmx:100804503 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01977 19 48834662 48838700 Gma19g01977 19 48834662 48838700 ECH
Gma19g01977 19 48834662 48838700 Gma03g01936 03 45203250 45207452 GST
Gma19g01977 19 48834662 48838700 Gma10g00202 10 1828078 1832917 PCT
Gma19g01977 19 48834662 48838700 Gma02g01397 02 16147628 16150457 PCT
Gma10g00202 10 1828078 1832917 Gma19g01977 19 48834662 48838700 PCT
Gma02g01397 02 16147628 16150457 Gma19g01977 19 48834662 48838700 PCT