Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00202 ATGGGAGTGGTCACTGTTGGAGAATTGAAGACTAGCATCTCAGGGAAGAGGACCTTTCGTCCAAGTTCAAGCATAAGGCATGCCACTGAGTGGCCAATATCTGATGTCTCTAGTGATCTCACCATCGAAGTAGGAGCTTCAAGCTTTGCACTTCACAAGTTTCCTCTTGTTTCCAGGAGTGGAAGGCTTCGGAAAATGTTGTTAGAAACAAAAGATTCAAAAGTTTCGCGCATTAGTCTCCCAAACTTGCCAGGTGGTGCAGAGGCATTTGAGCTGGCTGCCAAATTCTGTTATGGGATCAATGTTGAGTTCACTCTCTCCAATGTTGCCATGCTAAAATGTGTAGCGCATTTCCTAGAAATGACAGAAGAGTTTGCAGAGAAAAACTTGGAGACGCAAGCCGAAGCATATCTAAAGGAGACAGTGCTCCCAAATATATCAAACACAATATCTGTTCTTCACCGTTGTGAATCTCTTGTTCCCATTTCAGAAGAGATTAGCCTTGTCAGCAGACTAATCAATGCAATTGCAAGCAATGCATGTAAAGAACAACTCACCACTGGTTTGCAAAAACTGGACCACAACTTCCCTTCTAAAACCGCCTCAAACATGGAACCCGAAACACCCTCAGAATGGTGGGGGAAATCTCTCAATGTTCTTAGCCTTGATTTCTTCCAAAGAGTTTTGTCTGCAGTGAAGTCAAAGGGACTAAAACAAGACATGATCAGCAAAATTTTGATAAACTATGCACATAATTCCCTTCAAGGGATTGTTAGGGACCACCAAGCAGTGAAAGCATGTTTTCCTGACTTGGAAGTACAAAAGAAACAAAGAGTCATTGTTGAAGCAATAGCTGGCTTACTACCCACTCAATCAAGGAAAAGCCTAGTTCCTATGGCATTTCTCTCAAGTTTGTTGAAAGCTGCAATAGCTGCATCAGCATCCACTTCTTGCAGATCTGATTTGGAGAAAAGGATTGGTCTACAACTTGACCAGGCTATTCTTGAAGACATCCTAATCGCAACAAATTCACATCAAAACACACATGGGGCTATTTATGACACGGATTCAATTTTGAGGATTTTTTCCAATTTTCTGAACTTGGATGAGGAGGATGAAGATGATAATAATGGTCACTTGAGAGATGAAAGTGAAATGGTTTATGACTTTGACAGCCCCGGATCTCCAAAACAAAGCTCAATTCTAAAGGTATCCAAATTAATGGACAACTATCTTGCTGAAGTGGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATATCCCTTGCTGAACTACTTCCAGATCATGCACGTATTGTGAGTGATGGGCTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGAACGGTACCGGCTATGCAAAACCATTGATTGCCAGAAAATGTCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTGCAGATGGCAGTTCAGGTTCTATACTTTGAGCAAATAAGGCTCCGCAATGCCATGAATGGAGGGCACAACCAATTGTTCTTTGGAGGAGGACTTAATGGTCCATTCCCTCAACGCTCAGGGAGTGGTGCAGGAAGTGGAGCCATTTCTCCGAGAGACAACTATGCATCAGTGAGAAGGGAGAACCGAGAGCTGAAGCTAGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCATGTCAACATGAAGCAGGAGCTAGTGAGGTCTCACCCTGCCAACAAGCTATTCAAATCATTCACCAAAAAACTAAGCAAGCTAAATGCTATGTTTCGGATTAACAGTATTAAGCCAGGTTCTGAGAGTCGCTTCCCTTTTCCTAAGAGAAGGCGTCACTCAGTTTCATGA 1887 0.4282 MGVVTVGELKTSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASSFALHKFPLVSRSGRLRKMLLETKDSKVSRISLPNLPGGAEAFELAAKFCYGINVEFTLSNVAMLKCVAHFLEMTEEFAEKNLETQAEAYLKETVLPNISNTISVLHRCESLVPISEEISLVSRLINAIASNACKEQLTTGLQKLDHNFPSKTASNMEPETPSEWWGKSLNVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVRDHQAVKACFPDLEVQKKQRVIVEAIAGLLPTQSRKSLVPMAFLSSLLKAAIAASASTSCRSDLEKRIGLQLDQAILEDILIATNSHQNTHGAIYDTDSILRIFSNFLNLDEEDEDDNNGHLRDESEMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKMSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQLFFGGGLNGPFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVNMKQELVRSHPANKLFKSFTKKLSKLNAMFRINSIKPGSESRFPFPKRRRHSVS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00202 628 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 621 - -
Gma10g00202 628 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Gma10g00202 628 Pfam BTB/POZ domain 37 140 IPR000210 GO:0005515
Gma10g00202 628 Gene3D Potassium Channel Kv1.1; Chain A 23 144 IPR011333 -
Gma10g00202 628 ProSiteProfiles NPH3 domain profile. 211 504 IPR027356 -
Gma10g00202 628 Coils Coil 545 579 - -
Gma10g00202 628 Pfam NPH3 family 211 480 IPR027356 -
Gma10g00202 628 PANTHER OS12G0117600 PROTEIN 25 621 IPR043454 -
Gma10g00202 628 SUPERFAMILY POZ domain 22 123 IPR011333 -
Gma10g00202 628 SMART BTB_4 38 142 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00202 Gma-Chr10 1828078 1832917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00202 1 454 EF-hand Containing Proteins AT2G47860 59.091 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00202 - - gmx:100807676 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00202 10 1828078 1832917 Gma10g00202 10 1828078 1832917 ECH
Gma10g00202 10 1828078 1832917 Gma02g01397 02 16147628 16150457 GST
Gma19g01977 19 48834662 48838700 Gma10g00202 10 1828078 1832917 PCT
Gma03g01936 03 45203250 45207452 Gma10g00202 10 1828078 1832917 PCT
Gma10g00202 10 1828078 1832917 Gma19g01977 19 48834662 48838700 PCT
Gma10g00202 10 1828078 1832917 Gma03g01936 03 45203250 45207452 PCT