Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01972 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATAAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAAGGAAATGGAGTGGGCTTTGAGGGACTGCCAACCCAATATAGCCATTGGATCGAATTCAGTTTGGATTCGGTCTGATGGTTTGGGAGTTCTAATAAGTCTAAGGAACAGAAATTCTGTACATATATATTTAGAAGATCACAGGTGCTTGATCAGTGGTGTATCAATATGGACAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGCTAGGCTGCACTGCTCCAGTCCCAGCTGTGTTCATAGGAGGGAAGCTAAGGGGATCCACCAATGA 417 0.4365 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGKEMEWALRDCQPNIAIGSNSVWIRSDGLGVLISLRNRNSVHIYLEDHRCLISGVSIWTRQRNGESSIEARLHCSSPSCVHRREAKGIHQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01972 138 Gene3D Glutaredoxin 1 94 - -
Gma19g01972 138 PANTHER GLUTAREDOXIN 1 75 IPR011905 -
Gma19g01972 138 SUPERFAMILY Thioredoxin-like 1 66 IPR036249 -
Gma19g01972 138 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Gma19g01972 138 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 75 - -
Gma19g01972 138 Pfam Glutaredoxin 14 66 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01972 Gma-Chr19 48804284 48807287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01972 1 65 Miscellaneous Gene Families AT4G15660 43.284 6.23e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01972 K03676 - gmx:100788094 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01972 19 48804284 48807287 Gma03g01931 03 45175899 45179030 GST
Gma19g01972 19 48804284 48807287 Gma10g00205 10 1863230 1864218 PCT
Gma19g01972 19 48804284 48807287 Gma02g01394 02 16120518 16121231 PCT
Gma10g00206 10 1874813 1875570 Gma19g01972 19 48804284 48807287 PCT
Gma02g01393 02 16111135 16111631 Gma19g01972 19 48804284 48807287 PCT