Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00205 ATGGATAGGGTAAGAGAGTTGGCATCAAAGAAGGCAGCAGTTATATTCACCAAGAGTTCATGTTACATGTGCCACAGCATCACGCAACTGTTCTATGAGCTTGGAGCAAGCCCAGCAGTGCATGAGCTAGACAAGGATGCATATGGGAGGGAAATGGAGTGGGCTTTGAGGAGCATGGGGTGCAACCCTTCAGTGCCAGCAGTGTTCATTGGTGGAAAATTTGTAGGCTCTTCAAAGGATGTCATATCCCTCCATGTTGATGGCTCTCTCAAACAAATGCTCATGGCTGCAAAAGCCATATGGTTCTAG 309 0.4725 MDRVRELASKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDKDAYGREMEWALRSMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMAAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00205 102 Gene3D Glutaredoxin 1 101 - -
Gma10g00205 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Gma10g00205 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Gma10g00205 102 Pfam Glutaredoxin 14 75 IPR002109 -
Gma10g00205 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Gma10g00205 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Gma10g00205 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gma10g00205 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gma10g00205 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Gma10g00205 102 CDD GRX_GRXh_1_2_like 12 93 - -
Gma10g00205 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00205 Gma-Chr10 1863230 1864218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00205 1 102 Miscellaneous Gene Families AT4G15700 47.059 3.74e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00205 K03676 - gmx:100305876 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00205 10 1863230 1864218 Gma10g00205 10 1863230 1864218 ECH
Gma10g00205 10 1863230 1864218 Gma02g01394 02 16120518 16121231 GST
Gma19g01972 19 48804284 48807287 Gma10g00205 10 1863230 1864218 PCT
Gma03g01931 03 45175899 45179030 Gma10g00205 10 1863230 1864218 PCT
Gma10g00205 10 1863230 1864218 Gma19g01974 19 48820202 48820787 PCT
Gma10g00205 10 1863230 1864218 Gma03g01933 03 45190934 45191615 PCT