Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01931 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATAAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAAGGAAATGGAGTGGGCTTTGAGGGGTATGGGCTGTAACCCTTCAGTCCCAGCAGTGTTCATTGGTGGAAAATTTGTGGGCTCATCCAAAGATGTCATATCCCTTCATGTTGATGGCTCTCTCAAACAATTGCTCATGGATGCAAAAGCCATCTGGTTTTATCTAAGGAACAGAATTCTGTACATATATATATTTAGAAGATCACAGGTCAACATTCTGTTTCAAGAACTTGGTGTGAATCCTGTGGTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGCAAGGCTGCACTGCTCCAGTTCCAGCTGTATTCATAGGAGGGAAGCTAATGGGATCCACCAATGAAATCATGTCCCTCCACCTAAGTGGTTCACTCACTCAGATGCTGAAACCTTACCAGGCTTTGTCTTGA 582 0.4347 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGKEMEWALRGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDAKAIWFYLRNRILYIYIFRRSQVNILFQELGVNPVVHEIDHDPEGREMEKALLRQGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQMLKPYQALS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01931 193 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Gma03g01931 193 PANTHER GLUTAREDOXIN 119 191 IPR011905 -
Gma03g01931 193 Gene3D Glutaredoxin 1 101 - -
Gma03g01931 193 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Gma03g01931 193 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Gma03g01931 193 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gma03g01931 193 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gma03g01931 193 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Gma03g01931 193 CDD GRX_GRXh_1_2_like 12 93 - -
Gma03g01931 193 Pfam Glutaredoxin 14 75 IPR002109 -
Gma03g01931 193 PANTHER GLUTAREDOXIN-C1 PROTEIN 119 191 - -
Gma03g01931 193 SUPERFAMILY Thioredoxin-like 118 190 IPR036249 -
Gma03g01931 193 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Gma03g01931 193 ProSiteProfiles Glutaredoxin domain profile. 119 193 - -
Gma03g01931 193 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Gma03g01931 193 Gene3D Glutaredoxin 114 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01931 Gma-Chr3 45175899 45179030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01931 119 192 Miscellaneous Gene Families AT4G15700 51.351 8.31e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01931 K03676 - gmx:100819447 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01931 03 45175899 45179030 Gma03g01931 03 45175899 45179030 ECH
Gma19g01972 19 48804284 48807287 Gma03g01931 03 45175899 45179030 GST
Gma03g01931 03 45175899 45179030 Gma10g00205 10 1863230 1864218 PCT
Gma03g01931 03 45175899 45179030 Gma02g01394 02 16120518 16121231 PCT
Gma10g00206 10 1874813 1875570 Gma03g01931 03 45175899 45179030 PCT
Gma02g01393 02 16111135 16111631 Gma03g01931 03 45175899 45179030 PCT