Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01934 ATGATGCCGAAACCGATGAACGTTTTGACAACAAAGCCCTCACCTTTGAGCACCATGGTGGTGCTGCTGATCCTCTGCATTCTGGGTTTCTACGCTCTGCATTTGCCTCACTCTTCCACACCTTCCTTCACTTCCAAAAGCCTTTCTCACTTGGAAAAACATTTTCTTTCCACTTCCTCAAACTCTACCATTTCTTCCTACCTCCGCGCTCTTACCCTGCACCCTCACCTCGCCGGAACAAAACCCGCTTCAGACACAACCCGCCACGTTCTCAACCACTTCACTTCATTGGGCCTACAGACCCATACAACAACGTACACCACTCTCCTTTCCTTCCCCGTGCGCTCTTCCCTCTCGGCGCACTTTAGCGATGGCGCTTCGGTAAGCCTGCGGCTCACCGAAGCGTCGGGGCCGGGGGTGGTGGCGGCGTACCACGCGTACTCGCCGTCGGGCAAGGTGCACGCGCGGGCGGTGTTCGCGAACTACGGGAGGGAGAGGGACTACCGCGCGCTGGCGGCGATGGGAGTGAACGTGAGCGGCTGCGTGGTGGTGGTGCGTAAGGGCGGAAGGATGGGGCGGGGCGCGGTAGTGGAGAGGGCGGAGGCGAACGGCGCGGCGGCGGTGCTGGTTTACGGCGAGGGTGACACGTGGCGGAAGGGGTTTGAGAGGGGACATGTGATGAGAGGGGGGATAGGGGACCCACTTACTCCAGGGTGGGCTGGGGTTGAGGGTGGTGAGACACTGGGGTTGGAAGATGGTGAGGTTTTGAAGAGGTTTCCTAAAATTCCATCTATGCCCTTGTCAGCTGAGGTGGCTGATACTATTTTGTCCTCTCTTGGGGGAGTTCCTCTGCCCCTTCAATGGAGGGGTACCCTTAAGTCTATGGTCAGGAATGTTGGTCCTGGCCCCACCATTCTCAATTTCACTTACCAGGGTGAAAAGAAGGTGGCCACCATTCAAAATGTTTTTGCCGTCATAATGGGATCCGAAGAACCTGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCACTACTCGATATTGCTCGTCGATTTTCTGCTCTATTGGGCTTGGGTTGGAAGCCGAGGAGGACAATCATTCTCTGCAGTTGGGATGCAGAGGAATTTGGGATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTATTAATCTTGGTTCCAAAGCTGTAGCATACCTTAATGTGGACTGTGCTGTGCAAGGTCCTGGTTTCTTTGTTGGTTCAACTCCTCAGCTAGACAGTCTTATTCTTGAGGTCACAAAAAAGGTCAAGGATCCTGACTCTGAGGGGGTATCATTATATGAAAATTGGGCTGCTGCTGCTGGTGGAGTCAATAATATTCAGAGGCTCAGTGGAGTAGATTCCGATTTTGCTCCATTTGTGCTACACGCAGGGGTTCCATCCATTGACATGTATTATGGAAGAGATTTTCCCGTCTATCACACTGCATTCGACTCCTATAACTGGATGGCAGAGTATGGAGATCCATTCTTCCACCGCCATGTTGCTGTTACTGGAGTTTGGGGGCTTCTGGCCCTTCACTTGGCTGATGATCCCGTTCTTCCTTTCAATTACGTTCCATATGCAAATGAGTTACAGTTGTACAAAAACACGTTGAGCAACTTGATAGACCAGAAAATTTCTCTACACCCATTAACCCTTTCAATTGAAGAATTTGCTTCTGCTGCCAAAGAAGCCAATGATGAATTAAAGAAACTGAGATTGCAAGAAAGTGAAAGTTGCTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCAGAAAAAGGCTTCTTGGATGCAGATGGACTTCAAGGAAGGCAGTGGTTCAAGCATCTCGTGTTTGGGCCTTCAAGCAACCATGAAAAGTTGAATTTCTTCCCAGGGATTTCTGATTCTATCACTAGATTGTCGGGTATAAGTGAAAGAGAAAGGCTATCATCAATCCAACACGAGATTTGGAGGGTTGCCAGAGCCATTCGTAGAGCTGCTTCTGCACTCAGTGGAGAATTCACCTAA 2091 0.5026 MMPKPMNVLTTKPSPLSTMVVLLILCILGFYALHLPHSSTPSFTSKSLSHLEKHFLSTSSNSTISSYLRALTLHPHLAGTKPASDTTRHVLNHFTSLGLQTHTTTYTTLLSFPVRSSLSAHFSDGASVSLRLTEASGPGVVAAYHAYSPSGKVHARAVFANYGRERDYRALAAMGVNVSGCVVVVRKGGRMGRGAVVERAEANGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGVEGGETLGLEDGEVLKRFPKIPSMPLSAEVADTILSSLGGVPLPLQWRGTLKSMVRNVGPGPTILNFTYQGEKKVATIQNVFAVIMGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSALLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLILEVTKKVKDPDSEGVSLYENWAAAAGGVNNIQRLSGVDSDFAPFVLHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYGDPFFHRHVAVTGVWGLLALHLADDPVLPFNYVPYANELQLYKNTLSNLIDQKISLHPLTLSIEEFASAAKEANDELKKLRLQESESCFVDMKKRALNDRLMLAEKGFLDADGLQGRQWFKHLVFGPSSNHEKLNFFPGISDSITRLSGISERERLSSIQHEIWRVARAIRRAASALSGEFT 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01934 696 Gene3D - 548 696 IPR036757 -
Gma19g01934 696 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 17 694 IPR039373 -
Gma19g01934 696 SUPERFAMILY Zn-dependent exopeptidases 59 542 - -
Gma19g01934 696 Gene3D - 116 312 - -
Gma19g01934 696 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 694 IPR036757 -
Gma19g01934 696 Coils Coil 577 597 - -
Gma19g01934 696 Gene3D Zn peptidases 62 543 - -
Gma19g01934 696 Pfam Peptidase family M28 321 509 IPR007484 -
Gma19g01934 696 SUPERFAMILY PA domain 109 323 IPR046450 -
Gma19g01934 696 Pfam PA domain 155 215 IPR003137 -
Gma19g01934 696 Pfam Transferrin receptor-like dimerisation domain 568 691 IPR007365 -
Gma19g01934 696 CDD M28_PSMA_like 317 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01934 Gma-Chr19 48519891 48524996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01934 K01301 - gmx:100798131 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01934 19 48519891 48524996 Gma19g01934 19 48519891 48524996 ECH
Gma19g01934 19 48519891 48524996 Gma03g01895 03 44877954 44884156 GST
Gma19g01934 19 48519891 48524996 Gma10g00806 10 11653323 11659663 PCT
Gma10g00806 10 11653323 11659663 Gma19g01934 19 48519891 48524996 PCT