Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00806 ATGGTTCCGTCAAATACCGTAACGGCATTCACCGCAAAGCCGTCTCCGTTATTAACTTTCGTAATGCTCATCGTCCTCGGCGTGGTGGGATTCTATTCCCTGCATTTCCCTCCCCGTCCCACCACCTCCCCCGACCCCTCGCGCTTCCGCCACGTGTTCGTATCGTCTTCGTCGAACTCCACTGTCGCGAGCTACCTCCGCGCCCTCACCGTGCACCCTCACCTCTCTGGAACAAAACCCGCCTCGTTAACCGCACGCTATGTGGTGAACCATTTCACCACCCTCGGCTTTCAAACAAAAACAGTACAACACTCTGCGCTGCTATCCTACCCGGTGCGCTCCTCGCTCGCCGCGCATTTTAGCGACGGCACGAGTTTCGAGTTTCAGTTAACCGAACCGGACACTGAGAAGGAAGTGGTGGCGCCGTACCACGCATACTCGCCGTCAGGTGCGGCGGAGGCGGCCGCGGTGTTTGTGAACTACGGGCGGGAGGAGGACTACCGTCAGCTGGTGGCTGCGGGGGTGGAGGTGGCGGGGTGCGTGGTGGTGGCGAGAGGCGGCGCACTGCCGCGCGGGGCGGTGGTGGAGGCGGCGGAGAGGCACGGTGCGGCGGCGGCGGCGGTGTTCGTGGAGAGGGACACGTGGCGCGAGGGGTTTGAGAGAGGGCACGTGATGAGAGGGGGGATAGGGGACCCACTGAGTCCTGgGTGGAGTGGGGTGGAAGGTGGTGAGAGTTTGGGTTTGGAAGATAGTGAGGTTTTGAAAAGGTTTCCGAAAATTCCATCTTTGCCCTTGTCTGCTGAGGCTGCGGAGAGGATCTTGGAGTCGCTTGGTGGTGCTCCTCTGCCCTTGGATTGGAGGGGTACCCTAAAGTCATCCAAGGTTAAGAATGTTGGCCCGGGCCCCACCATCCTCAACTTTACTTATCAGGGTGAATTGAAGGTGGCTACCATTGAAAACGTTTTTGCCATTATCAAGGGACGGGAAGAACCTGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCTGCTCTACTTGACATTGCTGGCAGATTTTCTATTCTATTGCGTTTGGGGTGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTGTCAATCTTCGTTCCAAAGCTGTAGCATACCTCAATGTAGACTGTGCTGTTCAAGGGCCTGGTTTCTTTGCTGGCTCAACTCCTCAGCTAGATGATCTTCTTGTCGAGGTCATAAAACAGGTCAAGGATCCTGACACTGAAGGTACTACAATATATGAGAATTGGGCAGCTGCTGGTGGAAACTCTAATATTCAAAGGCTCAGTGGTGTTGATTCTGATTTCGCTCCATTTGTGCAACATGCAGGGGTTCCATCTGTTGATGTATATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGATTCCTATAACTGGATGACAAAGTTTGGAGATCCATTCTTTCAGCGCCATGAAGCTGTTACTGGAATTTGGGGGCTTCTAGCCCTTCGCCTTGCTGATGATTCCATTATACCTTTCAATTATCTTTCTTATGCGAATCAGTTACAGGTCTACAATAACATATTGAGCAACTTGTTAGACAAGCAGATTACTCTACATCCACTAAATACTTCGATTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTAATGATGAATCAAAGAAATTAAAATGGCAAGAAGCTTCAGATCGTTCTATAGATATGAAAATGCGAGCATTGAATGATAGACTAATGCTTGCGGAAAGAGGCTTCTTGGACGTTGATGGGCTTCAAGGAAGGCAATGGTTCAAGCATCTTGTTTTTGGGCCTCCCAGCGACCATGAAAGCAAGTTGGATTTCTTCCCTGGAATCGCTGACTCTCTGTCTGGGATGGATAAAATGAGTGAAAAAGAAAGGCTTGCTGCAATTCAGCATGAGATCTGGAGGGTTGCCAGGGCCATTCAAAGAGCTGCTTCAGCACTAAGAGGGGATTTGGCTTAA 2088 0.5086 MVPSNTVTAFTAKPSPLLTFVMLIVLGVVGFYSLHFPPRPTTSPDPSRFRHVFVSSSSNSTVASYLRALTVHPHLSGTKPASLTARYVVNHFTTLGFQTKTVQHSALLSYPVRSSLAAHFSDGTSFEFQLTEPDTEKEVVAPYHAYSPSGAAEAAAVFVNYGREEDYRQLVAAGVEVAGCVVVARGGALPRGAVVEAAERHGAAAAAVFVERDTWREGFERGHVMRGGIGDPLSPGWSGVEGGESLGLEDSEVLKRFPKIPSLPLSAEAAERILESLGGAPLPLDWRGTLKSSKVKNVGPGPTILNFTYQGELKVATIENVFAIIKGREEPDRYVLLGNHRDAWTYGAVDPNSGTAALLDIAGRFSILLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLRSKAVAYLNVDCAVQGPGFFAGSTPQLDDLLVEVIKQVKDPDTEGTTIYENWAAAGGNSNIQRLSGVDSDFAPFVQHAGVPSVDVYYGKDYPVYHTAFDSYNWMTKFGDPFFQRHEAVTGIWGLLALRLADDSIIPFNYLSYANQLQVYNNILSNLLDKQITLHPLNTSIQEFASAAKEANDESKKLKWQEASDRSIDMKMRALNDRLMLAERGFLDVDGLQGRQWFKHLVFGPPSDHESKLDFFPGIADSLSGMDKMSEKERLAAIQHEIWRVARAIQRAASALRGDLA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00806 695 CDD M28_PSMA_like 316 542 - -
Gma10g00806 695 Gene3D Zn peptidases 61 541 - -
Gma10g00806 695 SUPERFAMILY Zn-dependent exopeptidases 61 538 - -
Gma10g00806 695 PANTHER F10A2.10 PROTEIN-RELATED 35 694 - -
Gma10g00806 695 Pfam Peptidase family M28 320 507 IPR007484 -
Gma10g00806 695 Gene3D - 544 695 IPR036757 -
Gma10g00806 695 Pfam Transferrin receptor-like dimerisation domain 566 690 IPR007365 -
Gma10g00806 695 SUPERFAMILY Transferrin receptor-like dimerisation domain 541 692 IPR036757 -
Gma10g00806 695 Gene3D - 114 311 - -
Gma10g00806 695 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 35 694 IPR039373 -
Gma10g00806 695 SUPERFAMILY PA domain 107 322 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00806 Gma-Chr10 11653323 11659663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00806 K01301 - gmx:100817485 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00806 10 11653323 11659663 Gma10g00806 10 11653323 11659663 ECH
Gma19g01934 19 48519891 48524996 Gma10g00806 10 11653323 11659663 PCT
Gma03g01895 03 44877954 44884156 Gma10g00806 10 11653323 11659663 PCT
Gma10g00806 10 11653323 11659663 Gma19g01934 19 48519891 48524996 PCT
Gma10g00806 10 11653323 11659663 Gma03g01895 03 44877954 44884156 PCT