Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01895 ATGATGCCGAAACAACCGATGAACGTTTTGACCACAAAACCTTCACCTTTGAGCACCATGGTGGTGATGCTGATCCTCTGCATTCTGGGTTTCTACGCTCTGCATTTCCCTCACTCTTCCACACCTTCCGAAAACCTCTCTCACTTGGAAAAACTTTTTCTTTCCACTTCCTCAAACTCTACTATTTCGTCCTACCTCCGCGCTCTTACCATGCACCCTCACCTCGCCGGAACAAAACCCGCTTCCGACACAACCCGCTACGTGCTTAACCACTTCACTTCATTGGGCCTCTCGGCCCATACAACAACCTACACCACTCTCCTCTCCTTCCCCGTGCGCTCCTCCCTCTCGGCGCATTTTAACGACGGTTCTTCGGTGAGCCTGCGGCTCACCGAAGAAGCGTCGGGGGCGGGGGTGGTGGCAGCGTACCACGCGTACTCGCCGTCGGGCGCGGTGCACGCGCCGGCGGTGTTCGCGAACTACGGGAGGCAGAGGGACTACCGCGCGCTGGCGGCGATGGGGGTGAACGTGAGCGGCTGCGTGGTGGTGGTGCGTAAGGGCGGGGAGATGGGGCGGGGCGCGGTGGTGGAGAGGGCGGAGGTGAACGGCGCGGCGGCAGTGCTCGTTTACGGCGAGGGTGACACGTGGCGGAAGGGGTTTGAGAGGGGACACGTGATGAGAGGGGGGATAGGAGACCCACTTACTCCCGGGTGGGCTGGGGTTGAAGGGGCTGAGACGCTGGGGTTGGAAGATAGGGAGGTTTTGAAGAGGTTTCCCAAAATTCCATCTATGCCCTTGTCAGCTGAGGTGGCTGATACTATTTTGTCCTCTCTTGGGGGTGTTCATGTGCCCCTTCATTGGAGGGGTACCCTTAGGTCTAAGGTCAGGCATGTTGGTCCTGGCCCCACCTTGCTCAATTTCACTTACGAGGGTGAAAAGAAGGTGGCCACCATTCAAAATGTTTTTGCTGTCATAAAGGGATCGGAAGAACCGGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGAACAGCTGCATTACTCGATATTGCTCGTCGATTTTCTGCTCTACTGGGCTTGGGGTGGAAGCCAAGGAGGACAATCATTCTCTGCAGTTGGGATGCAGAGGAATTTGGGATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTATTAATCTAGGTTCCAAAGCTGTAGCATACCTTAATGTGGACTGTGCTGTGCAAGGTCCTGATTTCTTTGTTGGTTCAACTCCTCAGCTAGACAATCTTATTCTTGAGGTCACAAACAAGGTCAAAGATCCTGACTCTGATGGTGTGTCATTGTATGAGAATTGGGCTGCTGGTGGTGGAGGCAATAATattcagaggctcagtggagttgattctgatttcgctccatttgtgcaacacgcaggggttccatccattgatatgtattatggaagagATTTTCCCGTCTATCACACTGCGTTCGACTCCTATAACTGGATGGCAGAGTATGGAGATCCATTCTTCCACCGCCATGTTGCTGTTACAGGAGTTTGGGGGCTTCTAGCTCTTCACTTGGCTGATGATCCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTGCAGTTGTACAAAAACACGTTGAGCAACTTGATAGACCAGAAAATTTCTCTACATCCATTAACCCTTTCAATTGAAGAATTTGCTTCTGCTGCCAAGGAAGCTGATGATGAAATAAAGAAACTGAGATTGCAAGAAACTGAAGGTTGTTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCAGAAAAAGGCTTCCTGGATGCAGATGGACTTCAGGGAAAGCAATGGTTTAAGCATCTTGTGTTTGGGCCTTCCAGCGACCATGAAAGGATCAATTTCTTCCCAGGGATTTCTGATTCTACCATTACGTCAGCAGGTGTAAGTGAAAGAGAAAGGCTAGCATCAATTCAACACGAAATCTGGAGGGTTGCCAGAGCCATTCGAAGAGCTGCTTCTGCACTCAGAGGAGAATTCACCTAA 2085 0.4863 MMPKQPMNVLTTKPSPLSTMVVMLILCILGFYALHFPHSSTPSENLSHLEKLFLSTSSNSTISSYLRALTMHPHLAGTKPASDTTRYVLNHFTSLGLSAHTTTYTTLLSFPVRSSLSAHFNDGSSVSLRLTEEASGAGVVAAYHAYSPSGAVHAPAVFANYGRQRDYRALAAMGVNVSGCVVVVRKGGEMGRGAVVERAEVNGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGVEGAETLGLEDREVLKRFPKIPSMPLSAEVADTILSSLGGVHVPLHWRGTLRSKVRHVGPGPTLLNFTYEGEKKVATIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSALLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPDFFVGSTPQLDNLILEVTNKVKDPDSDGVSLYENWAAGGGGNNIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYGDPFFHRHVAVTGVWGLLALHLADDPILPFNYVSYANELQLYKNTLSNLIDQKISLHPLTLSIEEFASAAKEADDEIKKLRLQETEGCFVDMKKRALNDRLMLAEKGFLDADGLQGKQWFKHLVFGPSSDHERINFFPGISDSTITSAGVSERERLASIQHEIWRVARAIRRAASALRGEFT 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01895 694 CDD M28_PSMA_like 316 542 - -
Gma03g01895 694 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 33 694 IPR039373 -
Gma03g01895 694 Gene3D - 114 311 - -
Gma03g01895 694 SUPERFAMILY Transferrin receptor-like dimerisation domain 530 693 IPR036757 -
Gma03g01895 694 Gene3D - 544 694 IPR036757 -
Gma03g01895 694 PANTHER F10A2.10 PROTEIN-RELATED 33 694 - -
Gma03g01895 694 Pfam Peptidase family M28 320 507 IPR007484 -
Gma03g01895 694 SUPERFAMILY PA domain 107 322 IPR046450 -
Gma03g01895 694 SUPERFAMILY Zn-dependent exopeptidases 58 540 - -
Gma03g01895 694 Gene3D Zn peptidases 60 541 - -
Gma03g01895 694 Coils Coil 575 595 - -
Gma03g01895 694 Pfam Transferrin receptor-like dimerisation domain 566 689 IPR007365 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01895 Gma-Chr3 44877954 44884156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01895 K01301 - gmx:100818733 1376.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01895 03 44877954 44884156 Gma03g01895 03 44877954 44884156 ECH
Gma19g01934 19 48519891 48524996 Gma03g01895 03 44877954 44884156 GST
Gma03g01895 03 44877954 44884156 Gma10g00806 10 11653323 11659663 PCT
Gma10g00806 10 11653323 11659663 Gma03g01895 03 44877954 44884156 PCT