Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01891 ATGTCGGTTAAGGAGTGCCACCACCACCACAAGGGAAAGAAGCACAAGCTCTGGAGACGCATCTTCTGGGGAATAGTGATCTTCGCCTTCATCGTGTTACTGACAGTTCTTATAATCTGGGCAATCCTAAAGCCTTCAAAACCAACCTTCATCCTCCAAGACGTCACCGTTTACGGCTTCAATGCCACCATCCCCAACTTCCTCACCTCAAGTTTTCAGGTCACGCTTTCCTCGCGCAACCCCAACGACAAAATCGGAATCTACTACGACCGTCTCAACACCTACGTAACTTACCGGAACCAGCAGGTCACGTACCGAACCTCAATCCCACCCTCGTACCAAGGTCACAAGGAAGAGGATGTGTGGTCCCCGTTTGTCTACGGCACTAATGTCCCCGTCGCACCCTACAACTTCGTTGGCCTCAGTCAAGACCAGACCAACGGCAACGTCCTCGTCCTCGTTAAGATTGACGGTAAGGTACGATGGAAAGTTGGTTCCTTCGTCTCTGCTCACTACAACCTCAATGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCCCAAAGCAACGGGATTGCCCTTGGCAATAACGCTGTTAAGTATCAATTGGTTCAACGCTGCACCGTCGGGGTTTGA 633 0.5103 MSVKECHHHHKGKKHKLWRRIFWGIVIFAFIVLLTVLIIWAILKPSKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDKIGIYYDRLNTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFVGLSQDQTNGNVLVLVKIDGKVRWKVGSFVSAHYNLNVRCPAFITFGPQSNGIALGNNAVKYQLVQRCTVGV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01891 210 PANTHER OS05G0367900 PROTEIN 8 210 IPR044839 GO:0098542
Gma19g01891 210 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 8 210 - -
Gma19g01891 210 Pfam Late embryogenesis abundant protein 75 178 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01891 Gma-Chr19 48098768 48099931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01891 7 178 EF-hand Containing Proteins AT5G21130 21.667 2.32e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01891 - - gmx:100500476 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01891 19 48098768 48099931 Gma19g01891 19 48098768 48099931 ECH
Gma19g01891 19 48098768 48099931 Gma03g01854 03 44487188 44488428 GST
Gma19g01891 19 48098768 48099931 Gma10g00738 10 9300899 9302360 PCT
Gma19g01891 19 48098768 48099931 Gma02g01870 02 43376706 43377809 PCT
Gma10g00738 10 9300899 9302360 Gma19g01891 19 48098768 48099931 PCT
Gma02g01870 02 43376706 43377809 Gma19g01891 19 48098768 48099931 PCT