Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01854 ATGTCGGTAAAGGAGTGTCACCACCACAAGGGAAAGAAGCACAAACTCTGGAGACGCATCTTCTGGGGCATAGTGATCTTCGCCTTCATCGTGTTGCTAACAGTTCTTATAATCTGGGCAATCCTAAAGCCTTCAAAGCCAACCTTCATCCTCCAAGACGTGACCGTCTACGGCTTCAACGCCACCATCCCCAACTTCCTCACCTCAAGCTTTCAGGTCACGCTTTCCTCGCGCAACCCCAACGACAAAATCGGAGTCTACTACGACCGTCTCGACACCTACGTCACTTACCGGAACCAGCAGGTCACGTACCGAACCTCAATCCCACCCTCATACCAAGGTCACAAGGAAGAGGATGTGTGGTCCCCATTCGTCTTCGGCACTAACGTCCCCGTCGCACCCTTCAACTTCGTTGGTCTCAGTCAAGACCAGACCAACGGCAACGTCCTCGTCCTCGTTAAGATTGACGGTAAGGTACGATGGAAAGTTGGTACCTTCGTCTCTGGTCACTACAACCTCTATGTAAGGTGCCCTGCTTTCATAACTTTTGGCCCCCAAAGCACCGGGATTGCCCTTGGCAAGAACGCCGTTAAGTATCAATTGGTTCAACGCTGCACCGTCGGGGTTTGA 630 0.5206 MSVKECHHHKGKKHKLWRRIFWGIVIFAFIVLLTVLIIWAILKPSKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDKIGVYYDRLDTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVFGTNVPVAPFNFVGLSQDQTNGNVLVLVKIDGKVRWKVGTFVSGHYNLYVRCPAFITFGPQSTGIALGKNAVKYQLVQRCTVGV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01854 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Gma03g01854 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
Gma03g01854 209 Pfam Late embryogenesis abundant protein 74 176 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01854 Gma-Chr3 44487188 44488428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01854 - - gmx:100795832 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01854 03 44487188 44488428 Gma03g01854 03 44487188 44488428 ECH
Gma19g01891 19 48098768 48099931 Gma03g01854 03 44487188 44488428 GST
Gma03g01854 03 44487188 44488428 Gma10g00738 10 9300899 9302360 PCT
Gma03g01854 03 44487188 44488428 Gma02g01870 02 43376706 43377809 PCT
Gma10g00738 10 9300899 9302360 Gma03g01854 03 44487188 44488428 PCT
Gma02g01870 02 43376706 43377809 Gma03g01854 03 44487188 44488428 PCT