Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01870 ATGTCGGAGTGCGAGCACCACAAGGGGAAGAAGAGGAAGATCTTCCGGCAAGTGTTCTGGTGCATAGTGGTGTTCCTCTTCCTCGTGCTGCTCACAATTCTTTTGATATGGGCAATCCTTAGACCCACCAAACCCACCTTCACCCTCCAAGACGTCACGGTCTACGCCTTCAACGCCACCATACCGAACTTCCTCACTTCGAATTTTCAGGTCACGCTCATCTCGCGCAACCCGAACGACAACATCGGTGTTTACTACGACCGCCTCGAAATCTACGTGATCTACCGGAGCCAGCAGATCACGTACCGAACCGCCATCCCTCCGACCTACCAGGGCCACAATGAGATCAATGTTTGGTCTCCGTTTGTTTATGGTACCAACATCCCCGTCGCGCCGTTCAATTTCCTCCGCCTCAGCCAGGACCAGAGTGACGGTAATGTCCTCGTCACCATCCGAGCCGACGGAAGGGTTCGTTGGAAGGTCGGCGCCTTCATCTCCGGTCGCTACCACTTCTACGTCCGCTGCCCTGCCTTCATCTCCTTTGGCCCCCGCAGCAATGGAATCGTCGTCGGAGAAAACGCCATCAAGTTCCAGATAATCCAGCGGTGCTCCGTTAGTGTCTAA 624 0.5481 MSECEHHKGKKRKIFRQVFWCIVVFLFLVLLTILLIWAILRPTKPTFTLQDVTVYAFNATIPNFLTSNFQVTLISRNPNDNIGVYYDRLEIYVIYRSQQITYRTAIPPTYQGHNEINVWSPFVYGTNIPVAPFNFLRLSQDQSDGNVLVTIRADGRVRWKVGAFISGRYHFYVRCPAFISFGPRSNGIVVGENAIKFQIIQRCSVSV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01870 207 Pfam Late embryogenesis abundant protein 75 175 IPR004864 -
Gma02g01870 207 PANTHER OS05G0367900 PROTEIN 6 207 IPR044839 GO:0098542
Gma02g01870 207 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 6 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01870 Gma-Chr2 43376706 43377809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01870 - - gmx:100813741 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01870 02 43376706 43377809 Gma02g01870 02 43376706 43377809 ECH
Gma10g00738 10 9300899 9302360 Gma02g01870 02 43376706 43377809 GST
Gma19g01891 19 48098768 48099931 Gma02g01870 02 43376706 43377809 PCT
Gma03g01854 03 44487188 44488428 Gma02g01870 02 43376706 43377809 PCT
Gma02g01870 02 43376706 43377809 Gma19g01891 19 48098768 48099931 PCT
Gma02g01870 02 43376706 43377809 Gma03g01854 03 44487188 44488428 PCT