Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01885 ATGGAAGAGACCAATTCCAGATTCAAGAGGATTTGCGTCTTCTGTGGGAGCAGTTCAGGGAAGAAACCTACATATCAAGAAGCTGCTGTTCAACTTGGCAGGGAGCTGGTGGAAAGACGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTGATGGGCCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGTTTGTTCTCACACACTCCCCATTCTCTATAACAGGTGATCCTATTGGGGAAGTGAGAGCCGTATCTAGTATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCCGATGCCTTTATTGCCCTCCCTGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGtgggcctgttgaatgtggatggattttacaattccttgttgtcgttcattgacaaagccgttgatgaaggctttatatcccctacggcacgtcgcattatcgtgtcagcacccacagccaaacaattgatGCTAGAGCTAGAGGAACATGTTCCTGAGCAAGATGAGTTTGCGTCCAAGTTGGTGTGGGAAGAAAGACTTTACGTGACTGAATCAGAAGTTGCCATGTGA 636 0.3978 MEETNSRFKRICVFCGSSSGKKPTYQEAAVQLGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGFVLTHSPFSITGDPIGEVRAVSSMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPTARRIIVSAPTAKQLMLELEEHVPEQDEFASKLVWEERLYVTESEVAM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01885 211 PANTHER LOG FAMILY PROTEIN YJL055W 2 208 - -
Gma19g01885 211 Gene3D - 1 184 - -
Gma19g01885 211 SUPERFAMILY MCP/YpsA-like 7 184 - -
Gma19g01885 211 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG2 2 208 - -
Gma19g01885 211 TIGRFAM TIGR00730: TIGR00730 family protein 9 183 IPR005269 GO:0009691|GO:0016787
Gma19g01885 211 Pfam Possible lysine decarboxylase 53 179 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01885 Gma-Chr19 48060490 48065358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01885 K22522 - gmx:100788087 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01885 19 48060490 48065358 Gma19g01885 19 48060490 48065358 ECH
Gma19g01885 19 48060490 48065358 Gma03g01844 03 44436925 44441547 GST
Gma19g01885 19 48060490 48065358 Gma10g00725 10 8877031 8881291 PCT
Gma19g01885 19 48060490 48065358 Gma02g01880 02 43684373 43689517 PCT
Gma10g00725 10 8877031 8881291 Gma19g01885 19 48060490 48065358 PCT
Gma02g01880 02 43684373 43689517 Gma19g01885 19 48060490 48065358 PCT