Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01844 ATGGAAGAGACCAATTCCAGATTCAAGAGGATTTGCGTCTTCTGTGGGAGCAGTTCAGGGAAGAAACCTACCTATCAGGAAGCTGCTGTTCAACTTGGCAGGGAACTGGTGGAAAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAACAAGTCTTATGCCAAGAGAGATAACAGGTGATCCTATTGGGGAAGTGAGAGCCGTATCTAGTATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCCGATGCTTTTATTGCCCTCCCCGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGtgggcctgttgaatgtggatggattttacaattccttgttgtcgttcattgacaaagccgttgatgaaggctttatatcccctaaggcacgtcgcattatcgtgtcagcacccacagccaaacaattgatGCTAGAGCTAGAGGAACATGTTCCCGAGCAAGATGAGTTTGCGTCCAAGTTGGTGTGGGAAGAAAGACTGAATTACGTGACTGAATCAGAAGTTGCCATGTGA 642 0.3972 MEETNSRFKRICVFCGSSSGKKPTYQEAAVQLGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPTSLMPREITGDPIGEVRAVSSMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKQLMLELEEHVPEQDEFASKLVWEERLNYVTESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01844 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Gma03g01844 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG2 2 205 - -
Gma03g01844 213 Gene3D - 1 185 - -
Gma03g01844 213 PANTHER LOG FAMILY PROTEIN YJL055W 2 205 - -
Gma03g01844 213 SUPERFAMILY MCP/YpsA-like 7 180 - -
Gma03g01844 213 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01844 Gma-Chr3 44436925 44441547 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01844 K22522 - gmx:100792663 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01844 03 44436925 44441547 Gma03g01844 03 44436925 44441547 ECH
Gma19g01885 19 48060490 48065358 Gma03g01844 03 44436925 44441547 GST
Gma03g01844 03 44436925 44441547 Gma10g00725 10 8877031 8881291 PCT
Gma03g01844 03 44436925 44441547 Gma02g01880 02 43684373 43689517 PCT
Gma10g00725 10 8877031 8881291 Gma03g01844 03 44436925 44441547 PCT
Gma02g01880 02 43684373 43689517 Gma03g01844 03 44436925 44441547 PCT