Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01880 ATGGAAGAGACCAAATCCAAGTTCAAGAGGATTTGTGTGTACTGTGGAAGCAGTTCTGGTAACAAAGCCAGTTACCAAGAAGCTGCTGTGGAACTTGGCAAGGAGATGGTTGAGAGAAGAATTGATTTGGTCTATGGAGGTGGTAGCGTGGGCTTGATGGGTCTAGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTGGgCGTTATCCCAAAAAGCCTCATGCCAAGAGAGATAACTGGTGATCCTATTGGGGAAGTGAGAGCAGTATCCGATATGCATCAAAGAAAAGCTGAGATGGCTCGTCAAGCTGATGCATTCATTGCCCTTCCTGGGGGATATGGAACACTCGAAGAACTGCTTGAAATCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCGGTGGGCCTATTGAATGTGGAAGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATTTCACCAAAAGCACGTCGCATTATCGTGTCAGCACCCACAGCCAAAGATTTGGTTAGAGAGCTAGAGGAACATGTACCTGAGAGAGATGAAGTTGTATCCAAGTTGGTGTGGGAAGACAGGCTAAATTATGTGGTGCCTGAATCAGAAGTTGCCATGTGA 645 0.462 MEETKSKFKRICVYCGSSSGNKASYQEAAVELGKEMVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPKSLMPREITGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHSKPVGLLNVEGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKDLVRELEEHVPERDEVVSKLVWEDRLNYVVPESEVAM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01880 214 SUPERFAMILY MCP/YpsA-like 7 186 - -
Gma02g01880 214 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Gma02g01880 214 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 4 211 - -
Gma02g01880 214 PANTHER LOG FAMILY PROTEIN YJL055W 4 211 - -
Gma02g01880 214 Gene3D - 1 185 - -
Gma02g01880 214 TIGRFAM TIGR00730: TIGR00730 family protein 9 185 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01880 Gma-Chr2 43684373 43689517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01880 K22522 - gmx:100816928 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01880 02 43684373 43689517 Gma02g01880 02 43684373 43689517 ECH
Gma10g00725 10 8877031 8881291 Gma02g01880 02 43684373 43689517 GST
Gma19g01885 19 48060490 48065358 Gma02g01880 02 43684373 43689517 PCT
Gma03g01844 03 44436925 44441547 Gma02g01880 02 43684373 43689517 PCT
Gma02g01880 02 43684373 43689517 Gma19g01885 19 48060490 48065358 PCT
Gma02g01880 02 43684373 43689517 Gma03g01844 03 44436925 44441547 PCT