Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01796 ATGCATTCCGGTCACTTACTTCTCGAGGAACCCATTCGCATGGTTTCCATCCTCGAACCATCCAAGCCTAATTTCTTTCCGGCAATGACGAAGATCGTTGGTACCCTGGGTCCTAAATCTCGATCGGTCGAGGTTATTTCTGCTTGTCTCAAAGCTGGAATGTCAGTGGCTCGTTTCGACTTCTCTTGGGGTGACCCTGAATATCATCAGGAAACTTTGGAGAATCTGAAGAATGCTATCAAGACTACTAAGAAACTCTGTGCTGTTATGCTGGACACTGTTGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAAGCGATCTCGCTCCAGGCCGATGGTCAGGTTGTTCTGACTCCAGACCGGGGACAAGAAGCGTCTTCGCAGATACTGCCGATCAATTTCGATGGATTGGCAAAGTCAATGACGAAGGGAGACACCATTTTTATTGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCTGTATGGCTAGAGGTATCTGAAGTTAAAGGGCAGGATGTCATTTGTACTATAAAGAATTCGGCAACATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAGTTCATATTGACTTGCCTACCCTCACCGATAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTATCATTGTCATATACTAGGCATGCTGAAGATGTCCGCCAGGCACGTGAATTCCTTTCTAAGTTAGGTGATCTAAGCCAGACTCAAATATTTGCAAAAATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACGAGAAGCAGATGGTATTATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCCCCAGAGAAGGTATTTTTCTTTCAAAAATCTGCCCTATACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGTAATGATGCAATACTTCTAGGTGCTGAGACCTTACGCGGGTTATACCCTGTTGAGACTATTTCCACAGTTGGCAAAATTTGTGCAGAAGCTGAGAAAGTTTTCAATCAAGATCTTTATTTTAAGAAAACCGTCAAATATGTTGGAGAACCCATGACCCACTTGGAATCTATTGCATCCTCTGCGGTACGAGCAGCTATTAAGGTGAAGGCTTCTGTTATTATTTGCTTCACTTCTTCTGGAAGGGCTGCAAGATTGATAGCAAAATATAGACCAACCATGCCTGTTCTCTCTGTTGTGATCCCCCGACTCAAGTCAAATCAGCTGAAATGGAGCTTCAGTGGAGCTTTTGAGGACCAACTGCCAACTCATTTGTGGGAAAGCCTATTTACAATTAATGCTAGGCAATCACTTATTGTCAGAGGTCTCTTTCCCATGCTTGCCGATCCCCGACATCCTGCCGAGTCAACAAGTGCCACAAACGAGTCTATTCTAAAGGTTGCCCTTGATCATGGAAAAGCATCAGGAGTTATAAAGTCACACGATCGAGTAGTTGTTTGCCAGAAAGTTGGTGATGCATCCGTAGTTAAGATTATCGAGCTTGAAGATTAA 1629 0.434 MHSGHLLLEEPIRMVSILEPSKPNFFPAMTKIVGTLGPKSRSVEVISACLKAGMSVARFDFSWGDPEYHQETLENLKNAIKTTKKLCAVMLDTVGAEMQVVNKSEKAISLQADGQVVLTPDRGQEASSQILPINFDGLAKSMTKGDTIFIGQYLFTGSETTSVWLEVSEVKGQDVICTIKNSATLAGSLFTLHASQVHIDLPTLTDKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENVEGLTHFDEILREADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGNDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKSNQLKWSFSGAFEDQLPTHLWESLFTINARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDHGKASGVIKSHDRVVVCQKVGDASVVKIIELED 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01796 542 Gene3D - 30 362 IPR040442 -
Gma19g01796 542 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Gma19g01796 542 SUPERFAMILY PK C-terminal domain-like 389 529 IPR036918 -
Gma19g01796 542 PANTHER PYRUVATE KINASE 2 542 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PANTHER PYRUVATE KINASE 2 542 - -
Gma19g01796 542 Gene3D - 363 540 IPR036918 -
Gma19g01796 542 SUPERFAMILY PK beta-barrel domain-like 101 186 IPR011037 -
Gma19g01796 542 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 375 IPR015813 GO:0003824
Gma19g01796 542 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 TIGRFAM pyruv_kin: pyruvate kinase 30 440 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma19g01796 542 Pfam Pyruvate kinase, alpha/beta domain 395 537 IPR015795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01796 Gma-Chr19 47184633 47191264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01796 K00873 - gmx:100781158 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01796 19 47184633 47191264 Gma19g01796 19 47184633 47191264 ECH
Gma19g01796 19 47184633 47191264 Gma03g01744 03 43525232 43531835 GST
Gma19g01796 19 47184633 47191264 Gma10g00597 10 6289380 6295566 PCT
Gma19g01796 19 47184633 47191264 Gma13g01287 13 27266957 27273974 PCT
Gma10g00597 10 6289380 6295566 Gma19g01796 19 47184633 47191264 PCT
Gma13g01287 13 27266957 27273974 Gma19g01796 19 47184633 47191264 PCT