Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00597 ATGCCTTCCAGTCACTTGCTTCTCGAGGAACCTATTAGGATGGTCTCCATCCTTGAGCCATCCAAGCCTAGTTTTTTCTCTGCAATGACAAAGATTGTTGGTACCCTGGGACCTAAATCTAGATCCGTCGAAACCATTTCTGGTTGCCTCAAGGCTGGCATGTCTGTGGCTCGTTTTGACTTTTCATGGCATGACCCTGAGTACCACCAGGAGACTTTGGAGAATTTGAAGGCTGCTATCAAGAGTACTAAGAAGCTCTGTGCTGTTATGCTGGACACAGTGGGCGCTGAGATGCAGGTTGTTAACAAAAGTGAGAGAGCAATCTCGCTCGAGGCAAATGGTCTGGTTGTTCTAACTCCTGATCAGGGACAAGAAGCCTCTTCAGAGATATTGCCTATCAATTTTGATGGACTGGCTAAGGCAGTGAAGAAGGGAGACACCATTTTTATTGGTCAATACTTGTTCACGGGAAGTGAAACTACTTCTGTATGGCTAGAGGTATCTGAAGTCAAAGGGCAAGATGTTGTTTGTATTATAAAGAACACAGCTACATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAATTCATATTGATTTGCCTACTCTCACTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGTGTTAAAAACAAAATTGATTTTCTGTCACTGTCATATACTCGGCACGCTAAAGACGTTCGCCAGGCTCGCGAATTTCTTTCCAAGTTAGGTGATCTCAGCCAGACTCAAATTTTTGCAAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTTCAAGAAGCTGACGGTATTATCCTTTCCCGTGGGAATTTGGGTATTGATCTTCCACCAGAGAAGGTGTTTTTGTTTCAAAAATCTGCCCTTTACAAGTGTAACATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTGAGACCAACTCGTGCTGAAGCCACAGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCCATACTTCTGGGTGCTGAGACTTTACGTGGGTTGTACCCTATTGAGACTATTTCTACTGTTGGCAGAATTTGTTCTGAGGCTGAGAAAGTTTTCAATCAAGACCTTTATTTTAAGAGGACAGTCAAGTATGTTGGAGAACCCATGACCCACTTGGAATCTATTGCATCCTCTGCGGTACGGGCTGCAATTAAGGTGAAAGCATCTATTATAATTTGTTTCACTTCATCAGGAAGGGCTGCAAGATTGATCGCAAAGTATAGGCCAACAATGCCAGTACTATCTGTTGTGATCCCCCGACTCAAGACAAATCAGCTAAAGTGGAGCTTTAGTGGAGCTTTTGAGGCAAGACAATCACTTATCGTGAGAGGTCTCTTTCCTATGCTTGCAGATCCACGACATCCTGCTGAGTCAACAAGTGCAACAAATGAGTCTATTCTTAAGGTTGCCCTTGATCATGGAAAATCATTGGGAGTTATTAAGTCACATGACCGGGTAGTTGTTTGCCAGAAACTTGGTGATGCATCTGTGGTTAAGATTATTGAGCTTGAAGATTAA 1584 0.4331 MPSSHLLLEEPIRMVSILEPSKPSFFSAMTKIVGTLGPKSRSVETISGCLKAGMSVARFDFSWHDPEYHQETLENLKAAIKSTKKLCAVMLDTVGAEMQVVNKSERAISLEANGLVVLTPDQGQEASSEILPINFDGLAKAVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGQDVVCIIKNTATLAGSLFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAKDVRQAREFLSKLGDLSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPIETISTVGRICSEAEKVFNQDLYFKRTVKYVGEPMTHLESIASSAVRAAIKVKASIIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDHGKSLGVIKSHDRVVVCQKLGDASVVKIIELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00597 527 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Gma10g00597 527 Gene3D - 371 513 IPR036918 -
Gma10g00597 527 TIGRFAM pyruv_kin: pyruvate kinase 30 517 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 PANTHER PYRUVATE KINASE 3 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Gma10g00597 527 PANTHER PYRUVATE KINASE 3 527 - -
Gma10g00597 527 SUPERFAMILY PK beta-barrel domain-like 102 186 IPR011037 -
Gma10g00597 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 SUPERFAMILY PK C-terminal domain-like 358 515 IPR036918 -
Gma10g00597 527 Gene3D - 30 370 IPR040442 -
Gma10g00597 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g00597 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00597 Gma-Chr10 6289380 6295566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00597 K00873 - gmx:100801466 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00597 10 6289380 6295566 Gma10g00597 10 6289380 6295566 ECH
Gma10g00597 10 6289380 6295566 Gma13g01287 13 27266957 27273974 GST
Gma19g01796 19 47184633 47191264 Gma10g00597 10 6289380 6295566 PCT
Gma03g01744 03 43525232 43531835 Gma10g00597 10 6289380 6295566 PCT
Gma10g00597 10 6289380 6295566 Gma19g01796 19 47184633 47191264 PCT
Gma10g00597 10 6289380 6295566 Gma03g01744 03 43525232 43531835 PCT