Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01513 ATGGATGCAAATTGTTTTAGGCTGAACAAGAGCTCAGCACTATGTTCAACTCACTGGAACACCATCAAACGTAAACCAGAACATCCTTTGTGGCTGCAATGCTCAGAACGCCCTCAGACAAACATCACAGGAGAAACAAGAAAAACTAATGCCTACAAAGATAACTTGTTTAATCGTTTAGCAATACATCATCTTTCAAAAAGCGTTCAAGAAGCCACAGGACTCGCAGCAAGAGGTTATCATTCAAGCTCTTCACAAAGCATTCCCAAAGCCAATACTTTCATTGATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAGCCTCCAGCATCAATTGATGATACAGCACTGAAGCAACCTTGTTATAAACTATGCAAGGCATATAAAAAGCATGGAACGGACTGCCTCACTAGTTAA 423 0.4019 MDANCFRLNKSSALCSTHWNTIKRKPEHPLWLQCSERPQTNITGETRKTNAYKDNLFNRLAIHHLSKSVQEATGLAARGYHSSSSQSIPKANTFIDFDDMSCEMIFGQEPPASIDDTALKQPCYKLCKAYKKHGTDCLTS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01513 140 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 96 136 - -
Gma19g01513 140 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 25 82 - -
Gma19g01513 140 PANTHER BETA-CAROTENE ISOMERASE D27 25 82 IPR038938 -
Gma19g01513 140 PANTHER BETA-CAROTENE ISOMERASE D27 96 136 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01513 Gma-Chr19 44499490 44501556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01513 K17911 - gmx:102668346 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01513 19 44499490 44501556 Gma03g01454 03 40784101 40790277 GST
Gma19g01513 19 44499490 44501556 Gma10g00295 10 2740839 2746521 PCT
Gma19g01513 19 44499490 44501556 Gma02g01306 02 15152234 15158392 PCT
Gma10g00295 10 2740839 2746521 Gma19g01513 19 44499490 44501556 PCT
Gma02g01306 02 15152234 15158392 Gma19g01513 19 44499490 44501556 PCT