Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01454 ATGGATAGAAATTGTTTTAGCCTTACCAAGAAGAGTTCAGCACTATGTTTAACTCACTGGAACCCCATCAAACGTAAGCCAGAACATCCTTGTGTGGTTGCAATGCTCAGAACACCCTCAGACAACATCACAGGAGAAACAAGAAAAACTAATGCCTACAAAGATAACTTGTTTGATCGTTTAGCAATACACCATCTTTCAAAAAGCGTTCAAGAAGCCACGGGACTCGGTAACAATAAGAGTGGGTATGAGAGCTTGGTTGAGGCAGCTACTGTGGCTAAAATGAAATTTGATCCTATTCAGCAGCAAGAGGTTATCATTCAAGCTCTTCACAGAGCCTTCCCAAAGCCAATACTTTCATTGATAAAGACACTGCTACCACCATCTAAACTCTCAAGGGAATATTTTGCCGTTTTCACCACTTTGTTCTTTGCTTGGTTAGTCGGGCCTTCCGAGGTGAGAGAATCAGAGGTCAACGGGAGAAGGGAAAAAAATGTAGTCTACGTCACAAAATGCAGGTTTTTAGAGGAGACAAATTGTGTAGGGATGTGTATTAATCTCTGCAAAATGCCATCTCAATCGTTTATAAAGGACACTCTGGGGATGCCAGTCAACATGGTGCCCAATTTTGACGACATGAGTTGTGAGATGATATTTGGACAGGAGCCTCCAGCATCAACCGATGATCCAGCACTGAAGCAACCATGCTATAAACTATGCAAGGCATATAAAAAGCATGGAACAGACTGCCTCAGTAGTTAA 762 0.4213 MDRNCFSLTKKSSALCLTHWNPIKRKPEHPCVVAMLRTPSDNITGETRKTNAYKDNLFDRLAIHHLSKSVQEATGLGNNKSGYESLVEAATVAKMKFDPIQQQEVIIQALHRAFPKPILSLIKTLLPPSKLSREYFAVFTTLFFAWLVGPSEVRESEVNGRREKNVVYVTKCRFLEETNCVGMCINLCKMPSQSFIKDTLGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLCKAYKKHGTDCLSS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01454 253 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 21 249 - -
Gma03g01454 253 Pfam Beta-carotene isomerase D27-like, C-terminal 146 226 IPR025114 GO:0005506
Gma03g01454 253 PANTHER BETA-CAROTENE ISOMERASE D27 21 249 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01454 Gma-Chr3 40784101 40790277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01454 K17911 - gmx:100813404 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01513 19 44499490 44501556 Gma03g01454 03 40784101 40790277 GST
Gma03g01454 03 40784101 40790277 Gma10g00295 10 2740839 2746521 PCT
Gma03g01454 03 40784101 40790277 Gma02g01306 02 15152234 15158392 PCT
Gma10g00295 10 2740839 2746521 Gma03g01454 03 40784101 40790277 PCT
Gma02g01306 02 15152234 15158392 Gma03g01454 03 40784101 40790277 PCT