Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01306 ATGGAAGCAAAATTGGTTGCACAGTGCAATAGTCCAACACTAACTTTAGCTCACTGGAAACCAAAACAACCTTGTGTGGTTGGAGTGCTGGCAAGGCCTGCTGATGACATTTCAGGAGAAGCAAGAAAAACTAATCATGTGTACAAAGATGGCTTGTTTGATCGCATAGCCATAAACTATTTATCAAAATGCGTTCAAGAGGCAACAGGACTCAAAAATAGTAAGAGTGGTTATGAGAGCCTGGTAGAGGCAGCTACCCTGGCTTCGCAGAGATTTAGTCCTATTGAACAGCATCAACTTGTCATTCAATCCCTTGACAGAGCCTTTCCCAAGCCAATGCTTTTACTGATAAGGACACTGCTACCACCCTCTAAATTCGCAAGGAAATTGTTTGCCATCTTCACCACTTTGTTCTTTGCTTGGTTAGTCGGGCCCTCTGAGGTGAGAGAATCAGAGGTGGAGGGGAGAAGAGAAAGAAATGTAGTCCACATAAAAAAGTGCAGGTTCTTAGAAGAGACAAATTGTGTAGGAATGTGTATCAATCTTTGCAAACTCCCATCTCAATCGTTTATAAAAGATTCTCTGGATTTTGATGACATGAGTTGTGAGATGATATTTGGCGAGGATCCCCCAGAATCAACTGATGATCCAGCACTGAATCAACCGTGTTTTAAACTATGCAAGGCAAAAAGAAGCCATGGAACCAATTGCCTCGTTATAAATTAA 726 0.4174 MEAKLVAQCNSPTLTLAHWKPKQPCVVGVLARPADDISGEARKTNHVYKDGLFDRIAINYLSKCVQEATGLKNSKSGYESLVEAATLASQRFSPIEQHQLVIQSLDRAFPKPMLLLIRTLLPPSKFARKLFAIFTTLFFAWLVGPSEVRESEVEGRRERNVVHIKKCRFLEETNCVGMCINLCKLPSQSFIKDSLDFDDMSCEMIFGEDPPESTDDPALNQPCFKLCKAKRSHGTNCLVIN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01306 241 Pfam Beta-carotene isomerase D27-like, C-terminal 141 213 IPR025114 GO:0005506
Gma02g01306 241 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 17 235 - -
Gma02g01306 241 PANTHER BETA-CAROTENE ISOMERASE D27 17 235 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01306 Gma-Chr2 15152234 15158392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01306 K17911 - gmx:100782912 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01306 02 15152234 15158392 Gma02g01306 02 15152234 15158392 ECH
Gma10g00295 10 2740839 2746521 Gma02g01306 02 15152234 15158392 GST
Gma19g01513 19 44499490 44501556 Gma02g01306 02 15152234 15158392 PCT
Gma03g01454 03 40784101 40790277 Gma02g01306 02 15152234 15158392 PCT
Gma02g01306 02 15152234 15158392 Gma19g01513 19 44499490 44501556 PCT
Gma02g01306 02 15152234 15158392 Gma03g01454 03 40784101 40790277 PCT