Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01502 ATGGAACCAAAGTGCACCATAAACTGTCGCCGGCCGGAGTTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGTGTGCCCATGGAGTTTCTGTCACGCTCATGGAGTGCCTCAGCTCTTGAGGTCTCAAAAGCTCTTGCACCTCACTCTTCTTACAACAACTCCTCTTCCATTCCAGAACAAACTTCTGCTTCTGCTCCCAACCACAACAACAACCCTTTTTCTGAGGACTTGTCAACCATCTCTTCTAAGAATCAGTTCTCTTTTGCTTCCTCTGCCACCTCCCAGCTCGTCCTTGAACGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCATTAACTTCTGGAAGATTATCTCACAGCAGCGAGCCTTTGAATGGTGGTGGTTCCTTAACCGGAACAGATAGCCCTCCGATTTCACCTTCAGATGAATTTGACGATGTTGTTAAGTTTTTTCGGGCAAACAATTCCATTCACCCATTATTCAATGGTGGAAGAGCCAGTGCAACTATTGGCAATGGCACGGCTTGCTCAGGACCTAAAACTGTTGGAAGATGGTTGAAGGACCGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCACAATGCTCAGTTGCATGCTACTATATCAGTGGCTGCAGTGGCTGCTGCTGTAGCAGCCATTGCGGCTGCAACAGCAGGCTCATCTGCACCAAGCAAGGATGAGAAGATGGCAAAGACTGACACGGCTGTTGCTTCTGCAGCAACATTGGTTGCTGCACAGTGTGTGGAGGCTGCTGAAGCAATGGGGGCTGAGCGTGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTGAATGTCCGTTCTCATGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTAAGAGGGGCAGCAACCTTGAAAGCAAGAGCTTTGAAGGAGGTATGGAATATTGCCACTGTGACACCACTAGAAAGAGGCATAGGGGGAATTGGACTATGTGGTAAAAGTATTAAcagtaataccagtaataccagcaataccagCACTAGTGATAGTGGGGAAATTTTCAAAGGAGAAAATTTTCCAGGGTCCTGCAGCCAAGATCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATCGAACGGGCCAGgtaatgctaaaaatgaagagcagacatgttgcaggaaccattaccaaaaAGAAAAAGAATGTTGTGTTAGATATATGCGCGGATTTACCAGCATGGCCAGGAAGACATCTTCTTGATGATGGTGAAAAGCGACGGTACTTTGGATTGAAGACAGATGCAAGAGGGATTGTGGAGTTTGAGTGTCGAAATCAAAGAGAATATGACATTTGGACACAAGGGGTTTCAAGGCTTCTCTCTGTTGTTGCACAAAGACAAAGCAGATATGGAAATTGA 1458 0.4438 MEPKCTINCRRPEFVPTPLPESPRVPMEFLSRSWSASALEVSKALAPHSSYNNSSSIPEQTSASAPNHNNNPFSEDLSTISSKNQFSFASSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWLKDRREKKKEENRTHNAQLHATISVAAVAAAVAAIAAATAGSSAPSKDEKMAKTDTAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSINSNTSNTSNTSTSDSGEIFKGENFPGSCSQDLLAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICADLPAWPGRHLLDDGEKRRYFGLKTDARGIVEFECRNQREYDIWTQGVSRLLSVVAQRQSRYGN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01502 485 Pfam Plant pleckstrin homology-like region 371 476 IPR013666 -
Gma19g01502 485 MobiDBLite consensus disorder prediction 108 139 - -
Gma19g01502 485 PANTHER AUXIN CANALIZATION PROTEIN 1 485 - -
Gma19g01502 485 MobiDBLite consensus disorder prediction 108 143 - -
Gma19g01502 485 MobiDBLite consensus disorder prediction 48 77 - -
Gma19g01502 485 Pfam Auxin canalisation 20 321 IPR008546 -
Gma19g01502 485 PANTHER EXPRESSED PROTEIN 1 485 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01502 Gma-Chr19 44382194 44385708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01502 - - gmx:100793202 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01502 19 44382194 44385708 Gma19g01502 19 44382194 44385708 ECH
Gma19g01502 19 44382194 44385708 Gma03g01445 03 40673928 40677966 GST
Gma19g01502 19 44382194 44385708 Gma10g00283 10 2587142 2591317 PCT
Gma19g01502 19 44382194 44385708 Gma02g01319 02 15309505 15313268 PCT
Gma10g00283 10 2587142 2591317 Gma19g01502 19 44382194 44385708 PCT
Gma02g01319 02 15309505 15313268 Gma19g01502 19 44382194 44385708 PCT