Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01319 ATGGAACACAACCTCACAATGAAGTGTCGTAGAAATGAAAACCTTCTAACCAGTGGCACTCATTTGCCAGAAAGCCCTCGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTTCTCTTGAGGTCTCTAAAGCCCTTACACTTCCACCACCTCCACCTCTTTCTTCTTACATACCTTCCAAGCCTCCTAATGCACCCTCTTCTGTGACTAACTCCATTTCCGAAGAAACTTCAGAGGAATTCTCAACCATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCTGCCACCTCACAACTTGTCCTTGACCGCATAATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCATTAACGTCAGGTAGATTGTCTCATAGTAGTGAACCTTTGAACGGTGGTGCTTCTTTAACCGGAACGGATAGTCCACCAATTTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGAGCAAACAATTCGATTCACCCCTTGTTCAATGGTGGACGAGCCATGAGTGGTGCTACAGGGAATGCCACTCCTTGCTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAAAAGAAAGAAGAAAACAGAACCCACAATGCTCAACTGCATGCTTCAATTTCTGTTGCCGCGGTGGCAGCTGCAGTTGCAGCCGTCACCGCGGCAACAGCAGCCTCATCTGCAGCTGACAAGGATGACAAGATGGCCATGGCTGTGGCTTCTGCGGCCACGTTAGTTGCTGCTCAGTGTGTGGAGGCTGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTTACAGCTGCAGCTGCCACAGCTCTACGAGGGGCAGCGACCTTGAAAGCAAGAGCATTGAAAGAGGTGTGGAATATTACTGCAGTGACGCCAATTGAGAGTGGCATAGGGATTGGAATATGTGGTAAAGGCAATAACAGTAATTCTAGTACCAGTGATAGTGGGGAGATTATCAATGGTGAAATTTTTTTGGGTGCCTGCAGCCAAGAGCTCCTTGCTAGGGGCACTGCATTACTCAAACGGACACGTAAAGGCGATCTTCACTGGAAAATAGTTTCAGTTTATCTACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTAGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTAGATGTGTGCATAAATTTACCAGCGTGGCCAGGAAGACATCTGTTTGATGACAGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGGGGGATTGTGGAGTTCGAATGTAGAAATCAAAGAGAATATGATACCTGGACTCAAGGGGTTTCTAGACTTCTTTCCATGGTTGCAAGCAGACAAAACATAAATGGGGTTTGA 1446 0.4606 MEHNLTMKCRRNENLLTSGTHLPESPRVPMEFLSRSWSASSLEVSKALTLPPPPPLSSYIPSKPPNAPSSVTNSISEETSEEFSTMCGNQFSFASSATSQLVLDRIMSQSAREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHASISVAAVAAAVAAVTAATAASSAADKDDKMAMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNITAVTPIESGIGIGICGKGNNSNSSTSDSGEIINGEIFLGACSQELLARGTALLKRTRKGDLHWKIVSVYLHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCINLPAWPGRHLFDDSEERRYFGLKTEARGIVEFECRNQREYDTWTQGVSRLLSMVASRQNINGV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01319 481 MobiDBLite consensus disorder prediction 113 147 - -
Gma02g01319 481 MobiDBLite consensus disorder prediction 55 75 - -
Gma02g01319 481 Pfam Auxin canalisation 23 324 IPR008546 -
Gma02g01319 481 PANTHER AUXIN CANALIZATION PROTEIN 1 479 - -
Gma02g01319 481 PANTHER EXPRESSED PROTEIN 1 479 IPR040269 -
Gma02g01319 481 MobiDBLite consensus disorder prediction 113 144 - -
Gma02g01319 481 Pfam Plant pleckstrin homology-like region 368 472 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01319 Gma-Chr2 15309505 15313268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01319 - - gmx:100782024 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01319 02 15309505 15313268 Gma02g01319 02 15309505 15313268 ECH
Gma10g00283 10 2587142 2591317 Gma02g01319 02 15309505 15313268 GST
Gma19g01502 19 44382194 44385708 Gma02g01319 02 15309505 15313268 PCT
Gma03g01445 03 40673928 40677966 Gma02g01319 02 15309505 15313268 PCT
Gma02g01319 02 15309505 15313268 Gma19g01502 19 44382194 44385708 PCT
Gma02g01319 02 15309505 15313268 Gma03g01445 03 40673928 40677966 PCT