Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01445 ATGGAACCAAAGTGCACCTTAATAAACTGTCGCCGGCCGGAGTTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCAATGGAGTTTCTGTCACGCTCATGGAGTGCCTCTGCCCTTGAGGTCTCCAAAGCTCTTGCACCTCATCACTCTAATTCCAACAACAACACTTCTTCCATTCCAGAAGAAACTTCTGTTTCTGCTCCCAACCACAACAGCAACAACTCTTTTTCTGAGGACTTCTCCACAACCATTTCTTCTAAGAATCAGTTCTCTTTTGCTTCCTCTGCCACCTCCCAGCTCGTCCTTGAACGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCATTAACTTCTGGAAGATTATCTCACAGCAGCGAGCCTTTGAATGGTGGTGGTTCCTTAACCGGAACAGATAGCCCTCCGATTTCACCTTCAGATGAATTCGACGATGTTGTTAAGTTTTTTCGGGCAAACAATTCCATTCACCCTTTATTCAATGGTGGAAGAACCAGTGCAACCATTGGCAATGGCACGGCTTGCTCAGGACCTAAAACTGTTGGAAGATGGTTGAAGGAGCGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCACAATGCTCAGCTGCATGCCACTATTTCAGTGGCAGCAGTGGCTGCTGCTGTAGCAGCCATTGCGGCCGCAACAGCAGCTGGCTCATCTGCACCAAGCAAGGATGAGAAGATGGCAAAGACTGACATGGCTGTTGCTTCTGCAGCAACATTGGTTGCTGCACAGTGTGTAGAGGCTGCTGAAGCAATGGGGGCTGAGCGTGACCACCTTGCTTCAGTGGTTAGCTCTGCTGTGAATGTTCGTTCTCCTGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTAAGAGGGGCAGCAACCTTGAAAGCAAGAGCTTTGAAGGAGGTATGGAATATTGCTACAGTGACACCACTAGAGAGAGGCATAGGGGGGATTGGACTATGTGGTAAAAGTATTAACAGCAATACCAGCAATACCAGCACTAGTGACAGTGGGGAAATTTTCAATGGAGAAAATTTTCTAGGGTCCTGCAGCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGTAGTGATCTTCACTGGAAAATAGTGTCTGTTTATATACATAGAACTGGCCAGGTAATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGCTAGATATATGCACGGATTTACCAGCATGGCCAGGAAGACATCTTCTTGGCGATGGTGAGAAGCGACGGTACTTTGGATTGAAGACAGACGCAAGGGGGATTGTGGAGTTTGAGTGTCGAAATCAAAGAGAATATGACCTCTGGACACAAGGGGTTTCAAGGCTTCTTTCCGTTGTTGCACAAAGACAAAACAGATATGGAAATTGA 1470 0.4701 MEPKCTLINCRRPEFVPTPLPESPRVPMEFLSRSWSASALEVSKALAPHHSNSNNNTSSIPEETSVSAPNHNSNNSFSEDFSTTISSKNQFSFASSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRTSATIGNGTACSGPKTVGRWLKERREKKKEENRTHNAQLHATISVAAVAAAVAAIAAATAAGSSAPSKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSPDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSINSNTSNTSTSDSGEIFNGENFLGSCSQELLAKGSELLKRTRKGSDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLLGDGEKRRYFGLKTDARGIVEFECRNQREYDLWTQGVSRLLSVVAQRQNRYGN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01445 489 Pfam Auxin canalisation 21 327 IPR008546 -
Gma03g01445 489 PANTHER EXPRESSED PROTEIN 1 489 IPR040269 -
Gma03g01445 489 MobiDBLite consensus disorder prediction 48 81 - -
Gma03g01445 489 Pfam Plant pleckstrin homology-like region 374 480 IPR013666 -
Gma03g01445 489 PANTHER AUXIN CANALIZATION PROTEIN 1 489 - -
Gma03g01445 489 MobiDBLite consensus disorder prediction 112 144 - -
Gma03g01445 489 MobiDBLite consensus disorder prediction 112 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01445 Gma-Chr3 40673928 40677966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01445 - - gmx:100805743 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01445 03 40673928 40677966 Gma03g01445 03 40673928 40677966 ECH
Gma19g01502 19 44382194 44385708 Gma03g01445 03 40673928 40677966 GST
Gma03g01445 03 40673928 40677966 Gma10g00283 10 2587142 2591317 PCT
Gma03g01445 03 40673928 40677966 Gma02g01319 02 15309505 15313268 PCT
Gma10g00283 10 2587142 2591317 Gma03g01445 03 40673928 40677966 PCT
Gma02g01319 02 15309505 15313268 Gma03g01445 03 40673928 40677966 PCT