Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01473 ATGGCGAATCACTCAAGCAGCTTCGGCGGTCGCAGTGGAGTTCGAGTGGTGGTCGCCGGCGACCGCTCCACCGGAAAATCGAGCCTGATAGCCGCCATAGCGACGGAGTCATTCGCCGAGGCCGTTCCGCCGGTCCTTCCGCCCACCCTCCTGGCCCCTGATTTGTACCCCGACACCGTTCCTCTCACCGTCGTTGACACACCTTCCAGCTTGGAGAAGCAGAGAAAGCGTAATGAGGAATTGAAAGCAGCTGACGTTGTGGTGTTAACCTATGCTTGCAATGACACCGCGTCGTTTTCGCGGTTGAGTTCTTACTGGTTCCCGGAGCTGCAGAAGTTGGAGGTGAAGGTGCCTGTAATTGTGGTTGGTTGCAAGCTGGATCTTAGGGATGAAAGCCAGCAAGTGAGCTTGGAGTGTGTCATGACACAGCTCCTGCAACAGTTCAAGGAAATTGTCACCTGCATTGAATGCTCTGCTGCTACGCAATACCAGGTACCTGAAGTTTTTTATTTTGCTCAAAAAGCGGTACTTCATCCGATAGATCCTTTGTATGATCATGAAAGTCAAGCTTTAAAGGATCGATGTGTTAGGGCATTGAGAAGAATATTTGTTCTTTGTGATCGTGACATGGATGAAGCCCTTAATGACACAGAACTAAATGAGTTTCAGGTTAGATGCTTCAATGCACCATTGCAATCCTCTGAAATAGCAGGAGTCAAAAGGGTTGTACAGCAGAAAGTACCTGAAGGATTCAACTCACATGGTCTTACTTTTCCTGGATTTATTTATGTCCACAATATGTTCCTCAAAAAAGGGCGTCCAGAGACATTATGGGCTGTTCTAAGAAACTTTGGATATGATAATAATTTGAAACTCATGGATGATTTCCTTCCTGTTCCATCTAAGCATGCTTTCGATCAGAGTGTGGAGCTGACAGGTGAAGCTGTAGAGTTTCTAAATGGTATCTTTCGACTGTTAGATACAGATAAAGATCGAGCCCTAcgacctgctgaagttgataagttattttgtactgcaccagaaagTCCATGGGATGATGCTCTATATAAGGATGCTGCTGAGAGAACTAACATGGGTTACATATCTCTTAATGGATTCCTGGCGCAGTGGGTCCTTATGACATTACTTGATCCACCATGTAGCCTGGCTAATTTGATTTACATTGGATATAGTGGTAATCCAGCTGCTGCTCTTCGTGTTACCCGTAGAAGAGCAGTAGATCGCAAGAAGCAAGCAACAGAAAAGAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAAATGCTGGGAAGTCTGCTCTGTTGGATTCATTATTGGGAAGGCCTTTCTCAAACAATTATACTCCAACAACTGTTGAGAGGTTTGCAGCAAATTCCATTGAATTAATAGGGGGAACCAGAAAAACTCTTGTGTTGCGGGAGATACCAGAGAGTGAAGTATCGAATGTTTTGTCAAATAAGGGTTATTTGGCAGCATGTGATGTAGCTGTTTTTGTCTATGACAGCTCAGATGAACATTCATGGAAGAAATCCAGAGATTTGCTTGAGAAGGTTGGTAGACAAGGAGATCTAACTGGTTATAGAGTTCCTTGTCTCCTTATTGCCGCAAAGGATGATTTAACTCCATATCCAAGGGCAGTACAAGATTCAGTTAAGGTTACTGAGGAATTGGGAATAGAGGCACCTATTCATGTAAGTATGAAATTAGGCGATTCAAGTAACGTGTACCATAAGATTGTCAATGCTGCAGAGCACCCTCATTTAAGCATTCCAGAAACTGAGATTGGGAGGAAAAGAAAGCAATACCATCGGCTTCTTCAGCACTCTCTTGTTTTTGCCTCAGTTGGGACTGCTATGGCATTTGTTGGTTTGGCAGCATGTCGTGCATATGCAGTTAAAAAGAATTCCTCTGGTTAG 1935 0.432 MANHSSSFGGRSGVRVVVAGDRSTGKSSLIAAIATESFAEAVPPVLPPTLLAPDLYPDTVPLTVVDTPSSLEKQRKRNEELKAADVVVLTYACNDTASFSRLSSYWFPELQKLEVKVPVIVVGCKLDLRDESQQVSLECVMTQLLQQFKEIVTCIECSAATQYQVPEVFYFAQKAVLHPIDPLYDHESQALKDRCVRALRRIFVLCDRDMDEALNDTELNEFQVRCFNAPLQSSEIAGVKRVVQQKVPEGFNSHGLTFPGFIYVHNMFLKKGRPETLWAVLRNFGYDNNLKLMDDFLPVPSKHAFDQSVELTGEAVEFLNGIFRLLDTDKDRALRPAEVDKLFCTAPESPWDDALYKDAAERTNMGYISLNGFLAQWVLMTLLDPPCSLANLIYIGYSGNPAAALRVTRRRAVDRKKQATEKNVFQCYVFGSKNAGKSALLDSLLGRPFSNNYTPTTVERFAANSIELIGGTRKTLVLREIPESEVSNVLSNKGYLAACDVAVFVYDSSDEHSWKKSRDLLEKVGRQGDLTGYRVPCLLIAAKDDLTPYPRAVQDSVKVTEELGIEAPIHVSMKLGDSSNVYHKIVNAAEHPHLSIPETEIGRKRKQYHRLLQHSLVFASVGTAMAFVGLAACRAYAVKKNSSG 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01473 644 Gene3D - 11 181 IPR027417 -
Gma19g01473 644 PIRSF Miro 10 644 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
Gma19g01473 644 Pfam Ras family 429 554 IPR001806 GO:0003924|GO:0005525
Gma19g01473 644 Pfam Ras family 15 176 IPR001806 GO:0003924|GO:0005525
Gma19g01473 644 Gene3D - 186 290 - -
Gma19g01473 644 Pfam EF hand associated 351 418 IPR013566 -
Gma19g01473 644 PRINTS Transforming protein P21 ras signature 14 35 - -
Gma19g01473 644 PRINTS Transforming protein P21 ras signature 115 128 - -
Gma19g01473 644 PRINTS Transforming protein P21 ras signature 154 176 - -
Gma19g01473 644 PANTHER MITOCHONDRIAL RHO GTPASE 5 492 - -
Gma19g01473 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 210 IPR027417 -
Gma19g01473 644 Gene3D - 292 482 - -
Gma19g01473 644 Gene3D - 490 589 IPR027417 -
Gma19g01473 644 PANTHER RHO FAMILY GTPASE 5 492 IPR003578 GO:0005525|GO:0007264
Gma19g01473 644 SUPERFAMILY EF-hand 183 382 IPR011992 -
Gma19g01473 644 Pfam EF hand associated 230 313 IPR013567 -
Gma19g01473 644 SMART rab_sub_5 14 179 - -
Gma19g01473 644 CDD Miro2 421 600 - -
Gma19g01473 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 595 IPR027417 -
Gma19g01473 644 SMART rho_sub_3 16 179 IPR001806 GO:0003924|GO:0005525
Gma19g01473 644 SMART ras_sub_4 15 179 - -
Gma19g01473 644 ProSiteProfiles Miro domain profile. 11 178 IPR020860 GO:0003924|GO:0005525
Gma19g01473 644 ProSiteProfiles Miro domain profile. 422 591 IPR020860 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01473 Gma-Chr19 43963005 43971837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01473 1 642 EF-hand Containing Proteins AT3G63150 58.567 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01473 K07870 - gmx:100782061 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01473 19 43963005 43971837 Gma03g01410 03 40258858 40267714 GST
Gma19g01473 19 43963005 43971837 Gma10g00252 10 2308205 2317529 PCT
Gma19g01473 19 43963005 43971837 Gma02g01346 02 15609484 15620250 PCT
Gma10g00252 10 2308205 2317529 Gma19g01473 19 43963005 43971837 PCT
Gma02g01346 02 15609484 15620250 Gma19g01473 19 43963005 43971837 PCT