Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01448 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCACCACCGGCAATGGTGCAGCCGCCGCTGCTCGTCTCTGACCCCTTCGCCAAGGACGCCATTCTCGCCTGGTTCCACGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCCCTCTGCGGCCACCTCGCGCATCTCGCCGCCGCATCCTCAGACTACGACGCCGCTTTCGCCGCCATCCACCGCCGCCGCCTCAACTGGATCCCCGTCATCCAGATGCAGAAGTATCATTCCATCGCCGACGTCACTCTCGAGCTCCGCAGAGTCGCCGAGAAGAAAAGCGAGCACGAAGCAGCGAAAAAAAGCGAGAGCAGCTTCGAAGAGGAAGGGAAATTGGAGAAGGAAACGGCGGAAAACGGCGGAAACGACGGTGATGACGATGCCGCGCCGGAGTATGATTCGCCGGACAGTGAAATTACCGATTCAGGATCTCAGGAAATGCAACCCAGTGTGATGAACAACAACATATGTTCTAATCATGAAGAATGCGAAGGACGTTCTTCACAGATAAAGCTGACAAAAGGTTTCACAGCAAAGGAGTCCGTGAAGGGGCATATGGCAAGTTCTTTTGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGATGTTTTCTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTGAAGGAGATTCATGCTGCTGCCCAGAACGGGGAGCTCTCAGGTGAAACTTTTATACTGTTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCGATATTTAGACAGATAAAGGACGATAACAAAAGCAATATAGAACCGATTCCAGCACTTCTTCATGATGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGACCAACCTCTATCCACACTTCTTCTGTCTGAATCAACTATGGCTTTTGGGCGTATCCTTATGAGTGAAAATGATGGGAACTACAAGGGTCCACTCATGCTCTCATTGAAGGAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATTACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCCACCATGACAACTGCGATGACTCTTTGGCAACCTAGCATTGCTAGCCCATTTACTTTGCCAAACGGACCTCTAAGTGGCTATGAGGCTATGAATATGATGCCCCAGTTGGGAATACTTAGTGCTCCAATGGTCATGTTAGCTCCTATGCGCCCTATGGCAGCAAACACTCACAAACTTCCTCGAGGTGGAACTGGGGTTTTCTTGCCTTGGAAGGGGTCAGCCAGAAAACATGCAAGGCATCTTCCACCGCGTGCTCAAAAAGGACGCCTTATGGAATTACCCTCCCCAGTTGAATCACACACGGGAGAGTCCATTTCTGAACCCAGCATTGCTGTTGAAGGATAG 1569 0.4959 MAAVPASRTDPPPAMVQPPLLVSDPFAKDAILAWFHGEFAAANAIIDALCGHLAHLAAASSDYDAAFAAIHRRRLNWIPVIQMQKYHSIADVTLELRRVAEKKSEHEAAKKSESSFEEEGKLEKETAENGGNDGDDDAAPEYDSPDSEITDSGSQEMQPSVMNNNICSNHEECEGRSSQIKLTKGFTAKESVKGHMASSFVNVVKGLKLYEDVFSESEICKLTDFVKEIHAAAQNGELSGETFILFNKQMKGNKRELIQLGVPIFRQIKDDNKSNIEPIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKEGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTTAMTLWQPSIASPFTLPNGPLSGYEAMNMMPQLGILSAPMVMLAPMRPMAANTHKLPRGGTGVFLPWKGSARKHARHLPPRAQKGRLMELPSPVESHTGESISEPSIAVEG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01448 522 MobiDBLite consensus disorder prediction 104 131 - -
Gma19g01448 522 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 520 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gma19g01448 522 MobiDBLite consensus disorder prediction 104 168 - -
Gma19g01448 522 MobiDBLite consensus disorder prediction 147 168 - -
Gma19g01448 522 Gene3D - 189 405 IPR037151 -
Gma19g01448 522 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 301 398 IPR005123 -
Gma19g01448 522 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 1 520 - -
Gma19g01448 522 MobiDBLite consensus disorder prediction 482 522 - -
Gma19g01448 522 SUPERFAMILY Clavaminate synthase-like 200 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01448 Gma-Chr19 43684071 43690119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01448 K10767 - gmx:100776159 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01448 19 43684071 43690119 Gma19g01448 19 43684071 43690119 ECH
Gma19g01448 19 43684071 43690119 Gma03g01380 03 39928592 39934788 GST
Gma19g01448 19 43684071 43690119 Gma10g00230 10 2124940 2130500 PCT
Gma19g01448 19 43684071 43690119 Gma02g01365 02 15796862 15802228 PCT
Gma10g00230 10 2124940 2130500 Gma19g01448 19 43684071 43690119 PCT
Gma02g01365 02 15796862 15802228 Gma19g01448 19 43684071 43690119 PCT