Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00230 ATGGCGGCTGGCCCTACATCACTCTCCGATCGATCCACGATGGTCCCTCCCCCAATGCTCGTCTCCGACTCCTTCGCCAAGGACGCAATCCTCGCCTGGTTCCGCGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCCCTCTGCGCCCACCTCTCCTCCGCCGCTGCATCCTCCGCCCACGACTACGACGCCGTCTTCGCCGCCATCCACCGCCGCAGGCTCAACTGGATCCCCGTCCTCCAGATGCAGAAGTACCACTCCATCGCCGACGTCACGCTCGAGCTCGCCAGACTCGCCGATAGAAACCACTACGCTGCCGCCGAAGACGACGACGCCAAACACGAAACCGACGAGAAAACGACGCCGTCGGAGAGTGTCGGAGATGGTGGTGGCGGTGATGAACACGAGGAGTATGAGTCACCCGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCAGGCTAGTCCAACGAACGTTAATATATGTTCCAATCATGAACAGTGTGAAGGACGTTCTTCACAGTTTAAGTTGACAAAAGGTTTCACAGCAAAAGAGTCAGTGAAGGGACATATGGAGAATGTAGTAAAAGGATTGAAGTTATATGAGGACATTTTCACTGATTCAGAACTGTGCAAGCTGACAGATTTTGTCAATGAGATCCATGCTGCTGGCCAAAATGGGGAACTGTCAGGTGAAACTTTTATATTATTCAACAAGCAGATGAAAGGGAACAAGAGAGAGCTGATTCAACTGGGTGTTCCAATATTTGGACAGATAAAGGAGGATGCAAAATGCAATATAGAACCAATTCCAGCACTTCTCCAAGGTGTCATTGATCATCTTATTCAGTGGCAATTACTTCCCGAGTACAAAAGACCAAATGGTTGTATCATCAACTTCTTTGAAGAGGGGGAGTTTTCTCAGCCATTTCTGAAACCACCACATTTGGATCAACCTGTGTCGACTCTTCTTCTCTCTGAATCAACTATGGCTTTTGGGCGTATACTTATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCACGCTCTCATTGAAGCAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCCGACATGGCGAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAACCAATGCCAATCTCCAACTCCTACTACGATGACAAGTGCGATGACTGTGTGGCAACCTGGCATTGCCGCTAGTCCATATGCTTTGCCAAATGGTGCTCTAACTAGCTATGAGGGTATGGACATGAACATGATGCCCAAATGGGGAATGCTTCGCGCCCCAATGGTGATGCTTACTCCTATGCGTCCTGTGGCGCTGAACCCTCACAAACTTTCTGGTGGTGGGACTGGAGTGTTCTTGCCCTGGAATGTGCCATCTAGAAAACCTGCTAAGCATCTTCCCCCACGTGCACAAAAAGGAAGGCTTCTCACATTACCTTCCCCTGTTGAACCTCAAATGGGAGAGTCCACTTCTTAA 1536 0.5026 MAAGPTSLSDRSTMVPPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCAHLSSAAASSAHDYDAVFAAIHRRRLNWIPVLQMQKYHSIADVTLELARLADRNHYAAAEDDDAKHETDEKTTPSESVGDGGGGDEHEEYESPESEITDSGSQEMQASPTNVNICSNHEQCEGRSSQFKLTKGFTAKESVKGHMENVVKGLKLYEDIFTDSELCKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKCNIEPIPALLQGVIDHLIQWQLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILMSENDGNYKGPLTLSLKQGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTTMTSAMTVWQPGIAASPYALPNGALTSYEGMDMNMMPKWGMLRAPMVMLTPMRPVALNPHKLSGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLTLPSPVEPQMGESTS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00230 511 Gene3D - 183 398 IPR037151 -
Gma10g00230 511 SUPERFAMILY Clavaminate synthase-like 193 390 - -
Gma10g00230 511 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 11 510 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gma10g00230 511 MobiDBLite consensus disorder prediction 107 157 - -
Gma10g00230 511 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 294 391 IPR005123 -
Gma10g00230 511 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 11 510 - -
Gma10g00230 511 MobiDBLite consensus disorder prediction 479 511 - -
Gma10g00230 511 Pfam 2OG-Fe(II) oxygenase superfamily 299 388 IPR044861 -
Gma10g00230 511 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00230 Gma-Chr10 2124940 2130500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00230 K10767 - gmx:100802371 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00230 10 2124940 2130500 Gma10g00230 10 2124940 2130500 ECH
Gma10g00230 10 2124940 2130500 Gma02g01365 02 15796862 15802228 GST
Gma19g01448 19 43684071 43690119 Gma10g00230 10 2124940 2130500 PCT
Gma03g01380 03 39928592 39934788 Gma10g00230 10 2124940 2130500 PCT
Gma10g00230 10 2124940 2130500 Gma19g01448 19 43684071 43690119 PCT
Gma10g00230 10 2124940 2130500 Gma03g01380 03 39928592 39934788 PCT