Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01380 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCACCACCGGCAATGGTGGCGCCGCCGCCGTTGTTGGTCTCCGACTCCTTCGCCAAGGATGCCATTCTCGCCTGGTTCCGCGGCGAGTTCGCCGCCGCCAACGCCATCATCGACTCTCTCTGCGGCCACCTCGCGCACCTCGCCGCTGCATCCTCCGACTACGACGCCACCTTCACCGCCATCCACCGCCGCCGCCTCAACTGGATCCCCGTCATCCAGATGCAGAAGTATCACTCCATCGCCGACGTCACTCTCGAGCTCCGCAGAGTTGCCGAGAAGAAAACGGAGACCGAAGCCGCGAAGAAAAGCGAGAGCAGCTTCGACGAGGAAGGGAAATTGGAGAAGCAAGCGGTGGAGAATGGCGGAAACGACGGTGGTGACGACGATGCCGCGCCAGTGTATGATTCGCCGGACAGTGAAATTACTGATTCAGGATCTCAGGAAATGCAACCCAATGTGATGAACACCAATATATGTTCCAATCATGAAGAATGTGAAGGACGTTCTTCACAGATAAAGCTGACTAAGGGTTTCACAGCAAAGGAGTCCGTGAAGGGGCACATGGCAAGTTCTTTTGTGAATGTTGTAAAAGGATTAAAGTTGTATGAGGATGTTTTCTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTGAATGAGATTCATGCTGCTGGCCAGAACGGGGAGCTCTCAGGTGAAACTTTTATACTATTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCGATATTTGGACAGATAAAGGACGATACCAAAAACAACATAGAGCCGATTCCAGCACTTCTTCATGATGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATAATCAACTTTTTTGAAGAGGAGGAATTTTCTCAGCCATTCCTGAAACCACCACATTTGGACCAACCTCTATCCACCCTTCTTCTCTCTGAATCAACTATGGCTTTTGGGCGTATCCTTACGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGGAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGTACGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATCACCTTCTTTAGAGTGAGACCAGACTCCAATCATTGCCAATCACCAACTCCTACCATGACAACTGCGATGACTCTTTGGCACCCAAGCATTTCTAGCCCTTTTACTTTGCCAAAGGGACCTCTAAATGGCTATGAGGCTATGGATATGATGCCCCAATGGGGATTACTTAGTGCTCCAATGGTCATGCTAACTCCTATGCGCCCTATGGCAGTAAATACTCGCAAACTTCCTCGAGGTGGTACTGGGGTTTTCTTGCCTTGGAAGGGAGCATCCAGAAAACATACAAGGCATCTTCCACCGCGCGCTCAAAAAGGACGCCTTATGGAATTACCCTCCCCAGTTGAATCACACATGGGAGAGTCCACTTCTGAACCCAGCATTGCTGTTGAAGGATAG 1575 0.4946 MAAVPASRTDPPPAMVAPPPLLVSDSFAKDAILAWFRGEFAAANAIIDSLCGHLAHLAAASSDYDATFTAIHRRRLNWIPVIQMQKYHSIADVTLELRRVAEKKTETEAAKKSESSFDEEGKLEKQAVENGGNDGGDDDAAPVYDSPDSEITDSGSQEMQPNVMNTNICSNHEECEGRSSQIKLTKGFTAKESVKGHMASSFVNVVKGLKLYEDVFSESEICKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKNNIEPIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEEEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILTSENDGNYKGPLMLSLKEGSLLVMRGNSADMARYVMCPSPNRRVSITFFRVRPDSNHCQSPTPTMTTAMTLWHPSISSPFTLPKGPLNGYEAMDMMPQWGLLSAPMVMLTPMRPMAVNTRKLPRGGTGVFLPWKGASRKHTRHLPPRAQKGRLMELPSPVESHMGESTSEPSIAVEG 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01380 524 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 522 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gma03g01380 524 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 1 522 - -
Gma03g01380 524 MobiDBLite consensus disorder prediction 484 524 - -
Gma03g01380 524 Gene3D - 191 407 IPR037151 -
Gma03g01380 524 SUPERFAMILY Clavaminate synthase-like 202 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01380 Gma-Chr3 39928592 39934788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01380 K10767 - gmx:100796344 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01380 03 39928592 39934788 Gma03g01380 03 39928592 39934788 ECH
Gma19g01448 19 43684071 43690119 Gma03g01380 03 39928592 39934788 GST
Gma03g01380 03 39928592 39934788 Gma10g00230 10 2124940 2130500 PCT
Gma03g01380 03 39928592 39934788 Gma02g01365 02 15796862 15802228 PCT
Gma10g00230 10 2124940 2130500 Gma03g01380 03 39928592 39934788 PCT
Gma02g01365 02 15796862 15802228 Gma03g01380 03 39928592 39934788 PCT