LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma19g01407	ATGGCTCGTTACGGCGAGGGCGACAAGCGGTGGATCGTGGAGGACCGCCCCGACGGCACCAACGTCCACAACTGGCACTGGTCCGAGACCAACTGCCTCGACTGGTCCAAAACCTTCTTCAGCAACCTCCTCTCCAACCTCCCTATCCTCCACGGCGAGGCTAACCTCTTCCTCAAAACGACGTCGCTCCGCTCCCTCGACGGCGAGGCCTACGTCAACGTCCGCAAGGGGAAAATCATCCCCGGCTACGAGATCAGCCTCACACTCAATTGGCAGGGCGAAGCCAAAGATTCCCAGGGAACCTCGCTTCTTAAAGTCGACGGCACCGTCGAGATTCCCTACATCTCCGACGAGAACGCCGACGAGGATCCCGAGGTTAGGGTTACCGTTAACGATGAGGGACCGGTTGGGATGAGGATTAAGGACGCCATGCTTTCCAAGGGGAAGCCCTTGATCTTGGAGAAGGTTAGGGTTTGGGTCCAGAGCATGGCCAAAGGTGGTCCTGTTAAGGATGAATTGGAACCCAAGAAGGTTGCGCCGTCGTTGTCGCCGTCTCCGCcgacaacgacaacaacaacaacaacgacaacgacTGCTACgaagaaggaggagaagaaagagaaggagaaggagaaggagaagaaggggaggaagaGTATTGGCATGACGGAGAGGTTCAATTGCAGGGCCAAGGATTTGTATGAAATTTTGATGGATGAGAATAGGTGGAAGGGTTTTACACAGAGCAATGCGAGAATTAGTAAGGAGGTTGGCGGTGAGTTTAGCATTTTTGATGGGTCGGTGACCGGAACTAATTTGGAGTTGCAGGAGGCTAAGTTAATTGTTCAGAGATGGAGGTTTGGGAGCTGGAATGATGGAGTTCAATCCACAGTGAGGCTTGTGTTTGAGGAGCCTGAAGCCGGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCTACCGTGGTGGAGAACACGGAAAGGGGATGGCGGGATCTTATTTTCCAGAGGATACGTGCGGTTTTTGGTTTTGGAATTTGA	1065	0.4873	MARYGEGDKRWIVEDRPDGTNVHNWHWSETNCLDWSKTFFSNLLSNLPILHGEANLFLKTTSLRSLDGEAYVNVRKGKIIPGYEISLTLNWQGEAKDSQGTSLLKVDGTVEIPYISDENADEDPEVRVTVNDEGPVGMRIKDAMLSKGKPLILEKVRVWVQSMAKGGPVKDELEPKKVAPSLSPSPPTTTTTTTTTTTATKKEEKKEKEKEKEKKGRKSIGMTERFNCRAKDLYEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEAKLIVQRWRFGSWNDGVQSTVRLVFEEPEAGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI	354

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma19g01407	354	MobiDBLite	consensus disorder prediction	183	198	-	-
	Gma19g01407	354	Pfam	Activator of Hsp90 ATPase, N-terminal	29	165	IPR015310	GO:0001671\|GO:0051087
	Gma19g01407	354	SUPERFAMILY	Activator of Hsp90 ATPase, Aha1	20	165	IPR036338	-
	Gma19g01407	354	Gene3D	-	18	174	IPR036338	-
	Gma19g01407	354	Pfam	Activator of Hsp90 ATPase homolog 1-like protein	230	350	IPR013538	-
	Gma19g01407	354	PANTHER	ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN	1	354	-	-
	Gma19g01407	354	MobiDBLite	consensus disorder prediction	169	219	-	-
	Gma19g01407	354	Gene3D	-	217	353	IPR023393	-
	Gma19g01407	354	PANTHER	HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1	1	354	IPR039981	GO:0001671\|GO:0051879
	Gma19g01407	354	SUPERFAMILY	Bet v1-like	221	353	-	-
	Gma19g01407	354	SMART	Aha1_N_2	29	165	IPR015310	GO:0001671\|GO:0051087
	Gma19g01407	354	CDD	SRPBCC_Aha1	219	352	-	-
	Gma19g01407	354	MobiDBLite	consensus disorder prediction	199	219	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma19g01407	Gma-Chr19	43336802	43338065	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma19g01407	-		-	gmx:100812897	674.085

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma19g01407	19	43336802	43338065	Gma19g01407	19	43336802	43338065	ECH
	Gma19g01407	19	43336802	43338065	Gma03g01342	03	39582945	39584599	GST
	Gma19g01407	19	43336802	43338065	Gma02g01580	02	31890132	31892820	PCT
	Gma02g01580	02	31890132	31892820	Gma19g01407	19	43336802	43338065	PCT