Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01342 ATGGCTCGTTACGGTGAGGGCGACAAGCGGTGGATCGTGGAGGACCGCCCCGACGGCACCAATGTCCACAACTGGCATTGGTCCGAGACCAACTGCCTCGACTGGTCCAAGACCTTCTTCACCAGCCTCCTCACTAACCTCCCTATCCTCGACGGCGAGGGTAACCTCTTCCTCAAAACGACGTCGCTTCGCTCCCTCGACGGCGAGGCCTACATCAATGTCCGAAAGGGGAAGATCATCCCCGGCTACGAGATCAGCCTCACTCTCAATTGGCAGGGAGAGGCCAAAGACACCCTGGGAACCTCTCTTCTCAAGGTCGACGGCACCGTCGAGATCCCCTACATCTCCGACGAGAACGCCGACGAGGATCCCGAGGTTAGGGTTACTGTCGACGACGAGGGACCGGTTGGAAAGAGGATTAAGGATGCCATGGTTTCCAAGGGGAAGCCCTTGATCTTGGAGAAGGTTAGGGTTTGGGTGCAGAGCATGGCCAAAGGAGGTCCTGTTAAGGACGAATTGGAACCCAAGAAGGTTGcgccgtcgtcgttgtcgccgtctccggcggcgacaacgacaacgacgactccgacgacgacgaaaacaacggcTGCTGCGCCGAAGAAGGAGGAGAAGAAGGAGAAGGTGAAGAAGGGAAGGAAGAGTATTAGCATGACGGAGAGGTTTAATTGCAGAGCTAAAGATTTGTTTGAGATTTTGATGGATGAGAATAGGTGGAAGGGTTTTACACAGAGCAATGCGAGGATTAGTAAGGAGGTTGGGGGTGAATTTAGCATTTTCGATGGGTCGGTTACTGGAACTAATTTAGAGTTGCAGGAGGGTAAGTTGATTGTTCAGAGATGGAGGTTTGGAAGCTGGAATGATGGAGTTCAATCCACAGTGAGGCTTGAGTTTGAGGAGCCTGAATCGGGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCTTATTTTCCAGAGGATACGTGCTGTTTTTGGTTTTGGAATTTGA 1071 0.4827 MARYGEGDKRWIVEDRPDGTNVHNWHWSETNCLDWSKTFFTSLLTNLPILDGEGNLFLKTTSLRSLDGEAYINVRKGKIIPGYEISLTLNWQGEAKDTLGTSLLKVDGTVEIPYISDENADEDPEVRVTVDDEGPVGKRIKDAMVSKGKPLILEKVRVWVQSMAKGGPVKDELEPKKVAPSSLSPSPAATTTTTTPTTTKTTAAAPKKEEKKEKVKKGRKSISMTERFNCRAKDLFEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEGKLIVQRWRFGSWNDGVQSTVRLEFEEPESGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01342 356 MobiDBLite consensus disorder prediction 169 220 - -
Gma03g01342 356 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Gma03g01342 356 SUPERFAMILY Bet v1-like 221 355 - -
Gma03g01342 356 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 356 IPR039981 GO:0001671|GO:0051879
Gma03g01342 356 CDD SRPBCC_Aha1 221 354 - -
Gma03g01342 356 Pfam Activator of Hsp90 ATPase homolog 1-like protein 232 352 IPR013538 -
Gma03g01342 356 Gene3D - 18 174 IPR036338 -
Gma03g01342 356 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Gma03g01342 356 Coils Coil 356 356 - -
Gma03g01342 356 Gene3D - 219 355 IPR023393 -
Gma03g01342 356 MobiDBLite consensus disorder prediction 204 220 - -
Gma03g01342 356 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Gma03g01342 356 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 356 - -
Gma03g01342 356 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01342 Gma-Chr3 39582945 39584599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01342 - - gmx:100784184 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01342 03 39582945 39584599 Gma03g01342 03 39582945 39584599 ECH
Gma19g01407 19 43336802 43338065 Gma03g01342 03 39582945 39584599 GST
Gma03g01342 03 39582945 39584599 Gma02g01580 02 31890132 31892820 PCT
Gma02g01580 02 31890132 31892820 Gma03g01342 03 39582945 39584599 PCT