Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01580 ATGGCGAAGTTCGGCGAGGGTGACAAGCGGTGGATCGTGGCTGAGCGCCCCGACGGCACCAACGTGCACAACTGGCACTGGGCCGAGACCAACTGCCTCGAGTGGTCCAGAACCTTTTTCAACAACAGTTTCACCAACGTCGCCGTCGGTGACGGCGATGCCACTGTCACGATCAAGAAGGTGGAGAAGCTCGACGGCGAGGCCTATGTCAACGTCCGCAAGGGGAAGGTGATCCCCGGGTACGAGATCAGCGTGAGGCTCGCTTGGGAGGGCGAGGCGCGTGACGCCGACGGAAAGGTTCTGAAGAGAGTCGACGGCGCCGTCGAGATCCCGTACATCTCTGACGAGAACGCCGGCGAGGATCCGGAAATTAGGGTTTCGGTGAAGGAAAATGGCGAACTTGGGATTAAATTGATGGAGGTGATGTTGAAGAAGGGGAAGGTGGTGGTTTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCGAAGGGTGGGCCCGTGAAGGACGAGCTCGAAGCGAAGAAGGTGGCTGTTCCTCACAAGAACAACAACAACAATAGTAGTAATGGTGATAACAATGTTAAGAAGGAAGAGGTTAAGAAGAATGAGGGGAAGAAGGGGTTTAAGGTGATTAGTTTGATTGAGAAGTTTAATTGTAGGGCCAGGGATTTGTTTGAGATTCTGATGGATGAGAATAGATGGAGGGGGTTTACGCAGAGCAATGCAAGGATAAGCAAGGAGGTTGGAGGAGAGTTTAGTATTTTTGATGGGTCGGTGACCGGGAAGAATTTGGAGTTGGATGAAGGGAAGCTGATTGTGCAGGGATGGAGGTTTGGGAGCTGGCCGGATGGGATTGAATCCATGGTGAGGATTGTGTTTGAGGAGCCTGAAGATGGAGTCACTGTTGTTAAGCTCACACATAGTGATGTCCCTGAAGAAGACAGATATGGAAATGCAACTGTGGTGGAGAACACAGAGAGGGGATGGCGGGATCTCATTTTCCAAAGGATACGGACTGCGTTTGGTTTTGGAATTTGA 1038 0.5193 MAKFGEGDKRWIVAERPDGTNVHNWHWAETNCLEWSRTFFNNSFTNVAVGDGDATVTIKKVEKLDGEAYVNVRKGKVIPGYEISVRLAWEGEARDADGKVLKRVDGAVEIPYISDENAGEDPEIRVSVKENGELGIKLMEVMLKKGKVVVLEKVRVWVESMAKGGPVKDELEAKKVAVPHKNNNNNSSNGDNNVKKEEVKKNEGKKGFKVISLIEKFNCRARDLFEILMDENRWRGFTQSNARISKEVGGEFSIFDGSVTGKNLELDEGKLIVQGWRFGSWPDGIESMVRIVFEEPEDGVTVVKLTHSDVPEEDRYGNATVVENTERGWRDLIFQRIRTAFGFGI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01580 345 SMART Aha1_N_2 29 163 IPR015310 GO:0001671|GO:0051087
Gma02g01580 345 Gene3D - 209 344 IPR023393 -
Gma02g01580 345 CDD SRPBCC_Aha1 211 343 - -
Gma02g01580 345 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 345 - -
Gma02g01580 345 Pfam Activator of Hsp90 ATPase homolog 1-like protein 221 337 IPR013538 -
Gma02g01580 345 MobiDBLite consensus disorder prediction 177 200 - -
Gma02g01580 345 Gene3D - 18 172 IPR036338 -
Gma02g01580 345 Pfam Activator of Hsp90 ATPase, N-terminal 29 163 IPR015310 GO:0001671|GO:0051087
Gma02g01580 345 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 163 IPR036338 -
Gma02g01580 345 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 345 IPR039981 GO:0001671|GO:0051879
Gma02g01580 345 SUPERFAMILY Bet v1-like 217 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01580 Gma-Chr2 31890132 31892820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01580 - - gmx:100810706 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01580 02 31890132 31892820 Gma02g01580 02 31890132 31892820 ECH
Gma19g01407 19 43336802 43338065 Gma02g01580 02 31890132 31892820 PCT
Gma03g01342 03 39582945 39584599 Gma02g01580 02 31890132 31892820 PCT
Gma02g01580 02 31890132 31892820 Gma19g01407 19 43336802 43338065 PCT
Gma02g01580 02 31890132 31892820 Gma03g01342 03 39582945 39584599 PCT