Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01395 ATGACGGTGAAACCAATCCATCTTCAGATATGTGGATTGGTTAGTCAACGATGGAGTTGGAAACCCCGCACAGTCTCATCCCTCTCCTCATTTTCCCCAATTCCATACCCTAACCCTTATTCCAAACTGCTTCCCACCAACACCGTCGCTCGCAGGGTTCGATTCGCGCCATTTCACGCTTCCTCGTCGCCGCTTCCTTCTGCCGGTATTGTTCGAAACATCAAGTTCTGTCAGTGGTGTGGTGGTTCCACGAAGCATGATATTCCTGAAGGGGAGGAAAGGTTGAGAGCAATATGTACGGTTTGCGGGAAGATCGCGTATCAAAATCCGAAGATGGTAGTTGGCTGCCTCATTGAACATGATAACAAGGTCCTTCTTTGCAAGAGGAGTATTCAACCATCTCATGGCCTTTGGACCCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCTGCTGTGGAAGGTGCCATTAGGGAAACAAGGGAGGAAGCAAATGCAGACGTAGAAGTAATTTCTCCATTTGCCCAATTGGATATTCCTTTAATTGGCCAAAGTTACATGATATTCTTAGCAAAGCTGAAGAAGCACCATTTTTCACCTGGTCCAGAATCATCGGCATGCCAACTTTTTCCACTTGATGATATACCTTTCAATTCTTTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGGCTGGAAAGCTCAAATTCCATTATGGAACCATTAACAAAAGGCCGGGTACAAGTCCTTCTGATATTCGTGCCTATACACTGGATCACCATATGCATTCATGA 810 0.4457 MTVKPIHLQICGLVSQRWSWKPRTVSSLSSFSPIPYPNPYSKLLPTNTVARRVRFAPFHASSSPLPSAGIVRNIKFCQWCGGSTKHDIPEGEERLRAICTVCGKIAYQNPKMVVGCLIEHDNKVLLCKRSIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQSYMIFLAKLKKHHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKAGKLKFHYGTINKRPGTSPSDIRAYTLDHHMHS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01395 269 ProSiteProfiles Nudix hydrolase domain profile. 109 232 IPR000086 -
Gma19g01395 269 Pfam NUDIX domain 113 214 IPR000086 -
Gma19g01395 269 Pfam Nudix N-terminal 75 108 IPR029401 -
Gma19g01395 269 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 109 260 - -
Gma19g01395 269 SUPERFAMILY Nudix 75 232 IPR015797 -
Gma19g01395 269 ProSitePatterns Nudix box signature. 143 164 IPR020084 GO:0016787
Gma19g01395 269 Gene3D - 72 108 - -
Gma19g01395 269 PANTHER BNAA03G19740D PROTEIN 64 268 - -
Gma19g01395 269 PANTHER NUDIX HYDROLASE 23 64 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01395 Gma-Chr19 43242055 43245459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01395 K18453 - gmx:100808417 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01395 19 43242055 43245459 Gma19g01395 19 43242055 43245459 ECH
Gma19g01395 19 43242055 43245459 Gma03g01331 03 39483975 39488022 GST
Gma19g01395 19 43242055 43245459 Gma02g01596 02 32493879 32497058 PCT
Gma02g01596 02 32493879 32497058 Gma19g01395 19 43242055 43245459 PCT