Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01331 ATGATGGTGAAAGCAATTCAGCTTCAGATATGTGGATTGGTTAGTCAACGATGGAGTTGGAAACCCCGCACAGTCTCATCCCTGTCCTCATTTTCCTCAATTCCATACCCTAACCCTTATTCCAAACTGCTTCCCATCACCACCGTCGCTCGCTGGGTTCGATTCGTGCCATTTCACGCTTCCTCGTCGTCGCTTCCTTCTGCCGGGAATGTTCGAAACATTAAGTTCTGTCAGTGGTGTGGTGGTTCCACGAAGCATGATATTCCTGAAGGGGAGGAAAGGTTGAGAGCCATATGTACGGTTTGCGGGAAGATCGCATATCAGAATCCAAAGATGGTAGTTGGCTGCCTCATTGAACATGATAACAAGGTCCTTCTTTGCAAGAGGAGTATTCAACCATCTCATGGCCTTTGGACCCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCTGCTGTGGAAGGTGCCATCAGGGAAACAAGGGAGGAAGCAAATGCAGACGTAGAAGTAATTTCTCCATTTGCCCAATTGGATATTCCTTTAATTGGCCAAAGTTACATGATATTCTTAGCAAAGCTGAAGAAGCACCATTTTTCACCTGGTCCAGAATCATCAGCATGCCAACTTTTTCCACTTGATGATATACCTTTCAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGGCTGGAAAACTCAAATTCCATTATGGAACCATTAACAAAAGGCCGGGTACAAGTCCTTCCGATATTCGTGCCTATACACTGGATCACCATATGCATTCATGA 810 0.442 MMVKAIQLQICGLVSQRWSWKPRTVSSLSSFSSIPYPNPYSKLLPITTVARWVRFVPFHASSSSLPSAGNVRNIKFCQWCGGSTKHDIPEGEERLRAICTVCGKIAYQNPKMVVGCLIEHDNKVLLCKRSIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQSYMIFLAKLKKHHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKAGKLKFHYGTINKRPGTSPSDIRAYTLDHHMHS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01331 269 Pfam NUDIX domain 113 214 IPR000086 -
Gma03g01331 269 ProSiteProfiles Nudix hydrolase domain profile. 109 232 IPR000086 -
Gma03g01331 269 Pfam Nudix N-terminal 75 108 IPR029401 -
Gma03g01331 269 PANTHER BNAA03G19740D PROTEIN 60 268 - -
Gma03g01331 269 PANTHER NUDIX HYDROLASE 23 60 268 - -
Gma03g01331 269 SUPERFAMILY Nudix 75 232 IPR015797 -
Gma03g01331 269 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 109 260 - -
Gma03g01331 269 ProSitePatterns Nudix box signature. 143 164 IPR020084 GO:0016787
Gma03g01331 269 Gene3D - 72 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01331 Gma-Chr3 39483975 39488022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01331 K18453 - gmx:100808417 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01331 03 39483975 39488022 Gma03g01331 03 39483975 39488022 ECH
Gma19g01395 19 43242055 43245459 Gma03g01331 03 39483975 39488022 GST
Gma03g01331 03 39483975 39488022 Gma02g01596 02 32493879 32497058 PCT
Gma02g01596 02 32493879 32497058 Gma03g01331 03 39483975 39488022 PCT