Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01596 ATGGATTCTTCTTCTTATCACTCTCCCCCATCATCACTTCATTCTTTTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGGTGTGGTGGTCCAACGAAGCATGAAATACCGGAAGAAAGGTTGAGAGTTATATGTACAAGTTGTGGGAAGATTACCTATCAGAATCCAAAAATGTTAAAATCAACTCAATGCACCCCACTTATGGAGAAGTTAAATGAGAAATTTTTTGAAAAGTTGAGGACACTTCCTGATGGTTATTTAGAAATTGGAGAGTCGGCTATGGAAGGTGCTATCAGGGAAACACGGGAGGAAGCCAATGTTGACGTGGAAGTGATTTCTCCCTTTGCTCAATTGGATATTCCTTTAATTGGCCAAATTTTTGGTCATGATTATGGCATCTTAGCAAGGTTGAAGAAACCTCACTTTTCACTTGGTCCAGAATCATCAGAATGCCAGCTTTTCTCACTCAATGAAATACCCTACAGTTCTTTATCTTTTTCATCAATGGTTGTTACTTTAAGTTTGTATGTTGAGGATATGAAGGAAGGAGGAAAGCCTAAATTCCATTATGTTACCATTATCAAAAG 587 0.3799 MDSSSYHSPPSSLHSFGDVQNVKFCQWCGGPTKHEIPEERLRVICTSCGKITYQNPKMLKSTQCTPLMEKLNEKFFEKLRTLPDGYLEIGESAMEGAIRETREEANVDVEVISPFAQLDIPLIGQIFGHDYGILARLKKPHFSLGPESSECQLFSLNEIPYSSLSFSSMVVTLSLYVEDMKEGGKPKFHYVTIIK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01596 195 Gene3D - 20 54 - -
Gma02g01596 195 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 67 195 - -
Gma02g01596 195 PANTHER NUDIX HYDROLASE 23 12 195 - -
Gma02g01596 195 SUPERFAMILY Nudix 23 187 IPR015797 -
Gma02g01596 195 Pfam NUDIX domain 81 159 IPR000086 -
Gma02g01596 195 ProSitePatterns Nudix box signature. 85 106 IPR020084 GO:0016787
Gma02g01596 195 Pfam Nudix N-terminal 23 54 IPR029401 -
Gma02g01596 195 PANTHER BNAA03G19740D PROTEIN 12 195 - -
Gma02g01596 195 ProSiteProfiles Nudix hydrolase domain profile. 41 177 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01596 Gma-Chr2 32493879 32497058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01596 K18453 - gmx:100777180 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01596 02 32493879 32497058 Gma02g01596 02 32493879 32497058 ECH
Gma19g01395 19 43242055 43245459 Gma02g01596 02 32493879 32497058 PCT
Gma03g01331 03 39483975 39488022 Gma02g01596 02 32493879 32497058 PCT
Gma02g01596 02 32493879 32497058 Gma19g01395 19 43242055 43245459 PCT
Gma02g01596 02 32493879 32497058 Gma03g01331 03 39483975 39488022 PCT