Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01330 ATGGAACTTGCAAAACAACTGCTACTGTTGGCGATAAGATGGGTTCGTCCCACTGTGCGTGGCACCAAACCCGTGTTGTGCAATGGCCTCTCAGCAGTGCCTTTGGAAGACCGAATACTGATTCTTAAGAAGGGTTCTAAGCCTGATGATCGGATATGGTTCCTGGAGATTGACACCCAATATGTTAGGCAGCAGCAAAAAATTTTGGGGACTGAGGTAGTTGCATGGAGTAAAGGTGTGATAGGCAATGCTGAGAAGCCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACACTGATATCAATGCTTATGAAGGAATTTCCATCTATGTTTGGTTTTTCCGTGAGCCACACCACCCGTGCTCCAAGAGGTATCGAGAAAGATGGGGTTCATTACCATTTTACTGAGAAGAGTATAATGGAGAAAGAGATCAAAGAAGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGCAATCTGTATGGAACTAGTGTTGAGGCTGTCGAACTGGTAGCAGATGCAGGGAAAAGATGTATTCTTGATATTGACGTTCAAGGTGCAAGATCTGTGAGGGCTAGTACGCTTGAAGCTATATTCATCTTTATCTGCCCCCCATCAATGGAGGAGCTGGAGAAGCGCCTTCGTGACCGGGGGACAGAGACTGAGGAACAGATCCTGAAGCGACTACGAAATGCTGATGCTGAGATTGAGCAAGGGAAATCTTCTCAAATATTTGATTTCATCCTATACAATGACAATCTTGAGGAGTGTCATGAGAGACTTAAGAAACTATTGGGACTTGACGGTTTTGTCACTGCTCCACCTATATCAGGCCCTATAGAGATTGATTTACCAATGGATCATTCAGTGTCAAAAATTGATAACAAAATCATCATAAACTGCATCTCCTCAGGAGAGAAGGAATCAAAGAATTTGGTCATTTTGGATGTTTCCTCACTAAAAGGGGGTGCACCTGGACGGACAAGAGGCCTAAATTTCCAAGCCATTGGCTCTTTCTCAAATGGCTTGAATGGGATAGATCAACTTAGCTAA 1056 0.4375 MELAKQLLLLAIRWVRPTVRGTKPVLCNGLSAVPLEDRILILKKGSKPDDRIWFLEIDTQYVRQQQKILGTEVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGIEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASTLEAIFIFICPPSMEELEKRLRDRGTETEEQILKRLRNADAEIEQGKSSQIFDFILYNDNLEECHERLKKLLGLDGFVTAPPISGPIEIDLPMDHSVSKIDNKIIINCISSGEKESKNLVILDVSSLKGGAPGRTRGLNFQAIGSFSNGLNGIDQLS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01330 351 Pfam Guanylate kinase 85 266 IPR008145 -
Gma19g01330 351 ProSiteProfiles Guanylate kinase-like domain profile. 85 267 IPR008144 -
Gma19g01330 351 Gene3D - 81 269 IPR027417 -
Gma19g01330 351 SMART gk_7 84 270 IPR008145 -
Gma19g01330 351 ProSitePatterns Guanylate kinase-like signature. 120 137 IPR020590 -
Gma19g01330 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 266 IPR027417 -
Gma19g01330 351 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 13 277 - -
Gma19g01330 351 PANTHER GUANYLATE KINASE-RELATED 13 277 - -
Gma19g01330 351 CDD GMPK 87 263 - -
Gma19g01330 351 TIGRFAM guanyl_kin: guanylate kinase 86 266 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01330 Gma-Chr19 42614890 42618745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01330 K00942 - gmx:100527163 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01330 19 42614890 42618745 Gma19g01330 19 42614890 42618745 ECH
Gma19g01330 19 42614890 42618745 Gma03g01279 03 38884990 38889809 GST
Gma19g01330 19 42614890 42618745 Gma02g01707 02 36472887 36476790 PCT
Gma02g01707 02 36472887 36476790 Gma19g01330 19 42614890 42618745 PCT