Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01279 ATGGGAGAAGCACCAGCATTGCTTGTTGATGACGTGCAGGATGGGGCTCTGAATGGCCTTGAATTGAAAAACGTAACTTGCAAAACAACTGCTACAGTTGGCGATAAGGCGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAGTCTTGGAGAATGGGTTCGTCCCACTGTGCGGGGCACCAAACCTGTGTCGTGCAATGGCCTCTCAGCTGTGCCTTTGGAAGACCGAATACTGATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGATTGACACCCAATATGTTAGGCAGCAGCAAAAAATTTTGGGGTCTGAGGTGGTTGCATGGAGTAAAGGTGTGATAGGCAATGCTGAGAAGCCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACACTGATATCAATGCTTATGAAGGAATTTCCATCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCAAGAGGTATGGAGAAAGACGGGGTCCATTACCATTTTACTGAGAAGAGTATAATGGAGAAAGAAATCAAAGAGGGAAAGTTTCTTGAGTTTGCTTCCGTCCATGGTAATCTGTATGGAACAAGTGTTGAGGCTGTCGAACTGGTAGCAGATGCAGGGAAAAGATGTATTCTTGATATTGACGTTCAAGGTGCAAGATCTGTGAGGGCCAGTTCTCTTGAAGCCATATTCATCTTTATCTGTCCTCCATCAATGGAGGAGCTGGAGAAGCGCCTTCGTGACCGAGGGACAGAGACCGAGGAACAGATCCTTAAGCGACTACGTAATGCTGAGGCTGAGATTGAGCAAGGGAAATCTTCTCAAGTATTTGATTTCATCCTATACAATGAAAAACTTGAGGAGTGTTATGAGAGACTTAAGAAACTATTGGGACTTGACGGTTTCATCACTGCTCCACCTAAATCCGGACCTATAGAGATTGATTTACCAATGGACCATTCAGTGTCCAAAATTGATAACAAAATCATCATAAACTGCATCTCCTCAGGAGAAAAGGAATCCAAGAATTTGATCATTTTGGATGTTTCCTCACTAAAAGGGGGTGTACCTGGACGGACAAGAGGCCTAAATTTCCAAGCCATTGGCTCGTTCTCAAATGGCTTGAATGGGATAGATCAACTTAGCTAA 1200 0.4392 MGEAPALLVDDVQDGALNGLELKNVTCKTTATVGDKAYVIGGADDGTLSIEVQIFDRSLGEWVRPTVRGTKPVSCNGLSAVPLEDRILILKKGSKPDDQIWFLEIDTQYVRQQQKILGSEVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRDRGTETEEQILKRLRNAEAEIEQGKSSQVFDFILYNEKLEECYERLKKLLGLDGFITAPPKSGPIEIDLPMDHSVSKIDNKIIINCISSGEKESKNLIILDVSSLKGGVPGRTRGLNFQAIGSFSNGLNGIDQLS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01279 399 Gene3D - 129 316 IPR027417 -
Gma03g01279 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Gma03g01279 399 Coils Coil 271 291 - -
Gma03g01279 399 PANTHER GUANYLATE KINASE-RELATED 1 326 - -
Gma03g01279 399 SUPERFAMILY Galactose oxidase, central domain 30 113 IPR011043 -
Gma03g01279 399 SMART gk_7 132 318 IPR008145 -
Gma03g01279 399 Pfam Guanylate kinase 133 314 IPR008145 -
Gma03g01279 399 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Gma03g01279 399 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Gma03g01279 399 Gene3D - 24 128 IPR015915 GO:0005515
Gma03g01279 399 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Gma03g01279 399 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 326 - -
Gma03g01279 399 CDD GMPK 135 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01279 Gma-Chr3 38884990 38889809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01279 K00942 - gmx:100808931 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01279 03 38884990 38889809 Gma03g01279 03 38884990 38889809 ECH
Gma19g01330 19 42614890 42618745 Gma03g01279 03 38884990 38889809 GST
Gma03g01279 03 38884990 38889809 Gma02g01707 02 36472887 36476790 PCT
Gma02g01707 02 36472887 36476790 Gma03g01279 03 38884990 38889809 PCT