Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01707 ATGGGAGAAGCACCTACATTCATACCTCAAGACCTGCAGAATGGAACATGCAATGGGTTTGAATTAAAAAGTGGGACTTTTGAAACTGATACTATTGTTGGCAATAAAAAGTATGTCATTGGTGGAACCTATGGTGAAACCTTTTCGGTTAAAGATCAAATTCTTGACAACAATGGTCTCGGGGAATGGGTTGATCTCATTCAGCTAGGTACCAAACCCATTTCATGCAATGGCCACTCAGCCGTGCTTTTGAAAGACCGAATACTAATTCTTAAGAAAAATGCCAAGCCAGATGATTGTATATGGTTTCTGGAGGTGGACACTCCATATGTCAGGCAGCAGAAAAAAATTTTGGGGATTGATGTTGTTGCATGGAGTAAGGGTGTGATAGGAAATGCTGAGAAACCTGTTGTTATCAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTATGCTGATGACGGAATTCCCCTCTATGTTTGGTTTCTCTGTGAGCCACACAACCCGTGCCGCAAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACAGAGAAGAATGTTATGGAGAAAGAAATTAAAGATGGAAAGTTTCTGGAGTTTGCTTCTGTCCATGGTAATTTATACGGGACCAGTGTTGAGGCTGTGGAGATGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAGATCTGTGAGGGCTAGTTCTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGAAGAGCTGGAGAAACGTCTTCGTGACCGAGGGACAGAGACAGAAGAACAGGTCCTAAAGCGGTTACGAAATGCTCAGGCTGAGATTGAGCAAGGGAAGTCATCAGGCATATTTGATCACATCTTATATAATGGCAAACTTGAAGAGTGTTACGAGAATCTGAAGAAATTATTGGGACTTGATGGATATGTCACTCCTCCCAAGTCAGCACCAAAAAAGATGAATCTCCCAAGGGATCATTCAGTGTCAAAAATTGATGACAAAATCATCATAGGCTGCATCTCTTCAGGACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGATGTCTCCTCACTTAAAGGGGGCGCGCCCGGACGGACAAGAGGGCTAGATTTTCAAGTCATTGACTCGTTTTCAGATGGCTTCAATGGCAATGAACCATTTTGA 1200 0.4233 MGEAPTFIPQDLQNGTCNGFELKSGTFETDTIVGNKKYVIGGTYGETFSVKDQILDNNGLGEWVDLIQLGTKPISCNGHSAVLLKDRILILKKNAKPDDCIWFLEVDTPYVRQQKKILGIDVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMTEFPSMFGFSVSHTTRAARGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHGNLYGTSVEAVEMVSDAGKRCILDIDVQGARSVRASSLEAMFIFICPPSMEELEKRLRDRGTETEEQVLKRLRNAQAEIEQGKSSGIFDHILYNGKLEECYENLKKLLGLDGYVTPPKSAPKKMNLPRDHSVSKIDDKIIIGCISSGLEKESKNLIMLDVSSLKGGAPGRTRGLDFQVIDSFSDGFNGNEPF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01707 399 Pfam Guanylate kinase 134 315 IPR008145 -
Gma02g01707 399 SUPERFAMILY Galactose oxidase, central domain 31 114 IPR011043 -
Gma02g01707 399 SMART gk_7 133 319 IPR008145 -
Gma02g01707 399 ProSiteProfiles Guanylate kinase-like domain profile. 134 316 IPR008144 -
Gma02g01707 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 315 IPR027417 -
Gma02g01707 399 PANTHER GUANYLATE KINASE-RELATED 1 338 - -
Gma02g01707 399 Gene3D - 130 318 IPR027417 -
Gma02g01707 399 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 338 - -
Gma02g01707 399 CDD GMPK 136 255 - -
Gma02g01707 399 ProSitePatterns Guanylate kinase-like signature. 169 186 IPR020590 -
Gma02g01707 399 TIGRFAM guanyl_kin: guanylate kinase 135 315 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01707 Gma-Chr2 36472887 36476790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01707 K00942 - gmx:100812658 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01707 02 36472887 36476790 Gma02g01707 02 36472887 36476790 ECH
Gma19g01330 19 42614890 42618745 Gma02g01707 02 36472887 36476790 PCT
Gma03g01279 03 38884990 38889809 Gma02g01707 02 36472887 36476790 PCT
Gma02g01707 02 36472887 36476790 Gma19g01330 19 42614890 42618745 PCT
Gma02g01707 02 36472887 36476790 Gma03g01279 03 38884990 38889809 PCT