Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01038 ATGGAGGTACATTCTCCTGTCGGGGCCAAGAGATTATGGAATGTGTTGAGGGTAACCTTCTTCATGATAAGGAAGGGTTTGATCTCAAAGAGAAAGATGATCATGGACATGAATTTGATGATGAAGAAAGGAAAGGTGGTGAGAAAATCACTTAGCAATCTCATGTCATCACATCACCACCACCACAACCCTAAGAGCGTCACACGTGGCGGCGCCGCCTTAGGGGTGCATTATGAATTCTCTTGTAACAGTAGTCCAAATCCAATTTTTTTCAACATGCCAAAGCGCAAGCACCACTTCAACTTCCCCTGCATCCATGCCCCTGAGGTTCTCGAAGAGGAAGAAGAAACTGATTTTTCATTAGAAGTTGAAAGTGATGTGCCTAAGGCTGTGGTCACCGTGCCCAAAACCCCAGACTACGTGTACAACTTTTTTGTTGAGAAAAAGAGTCCTCTTCTCTCACCGTTCTCTGTGAGGGTCTCCAATTACTCTGCATTGGATGAAAATGAAGACATTGGAAATGACCATGTTGATGATCAAGCAGAGGATTTCATCAGAAGGTTCTATGAACAGCTTAGGACGCAAAGCCCAGTGCAATTCCTGCGTTACCAAGAGATGTAA 621 0.4428 MEVHSPVGAKRLWNVLRVTFFMIRKGLISKRKMIMDMNLMMKKGKVVRKSLSNLMSSHHHHHNPKSVTRGGAALGVHYEFSCNSSPNPIFFNMPKRKHHFNFPCIHAPEVLEEEEETDFSLEVESDVPKAVVTVPKTPDYVYNFFVEKKSPLLSPFSVRVSNYSALDENEDIGNDHVDDQAEDFIRRFYEQLRTQSPVQFLRYQEM 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01038 206 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 206 - -
Gma19g01038 206 Pfam Cotton fibre expressed protein 175 206 IPR008480 -
Gma19g01038 206 PANTHER OS01G0930500 PROTEIN 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01038 Gma-Chr19 38092691 38093501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01038 - - gmx:100806803 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01038 19 38092691 38093501 Gma16g00409 16 4361120 4362165 GST
Gma19g01038 19 38092691 38093501 Gma16g01367 16 32636500 32637108 PCT
Gma19g01038 19 38092691 38093501 Gma02g00612 02 6044160 6045485 PCT
Gma16g01367 16 32636500 32637108 Gma19g01038 19 38092691 38093501 PCT
Gma02g00612 02 6044160 6045485 Gma19g01038 19 38092691 38093501 PCT