Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01367 ATGGAGGCACATTCTCCAGTTATAGCCAAGAAGCTATGGAATGTGTTGAGGATCACTTTCTTCATGATCAGGAAGGGTTTGGTGTCAAAGAGGAAGCTGATTATGGACATGAATTTGATGATGAAGAAAGGGAAATTGCTCAGAAAATCTATGAGCAATTTCATGTCATCTCATCACCACCACCATCATCATCATTCAAAGAGTTTGGCACGTGGCTATGGCATGCAGGAATATGAATTCTCATGCAGCAACAGCCCAAGTCCTGTTTTTTTCCATGTGCCAAAGAAGAAGCACCATTTCAACTTCCCTTGCATGAATACCACAGAGGTTGTTGAAGAGCCTAGGCCCGTGGTTTTGGTGCCTAATATGACACCTGAATACACTTTCAACCATAGGTTTGATAATGCATCTGATTTTGCTCCTGGGGAGAGGATCTCACCCTTCACTGTGAGGATCTCCAACTACTCATCTGAGGATGAAGAAAATGAACAAGAGGGTGGAAATGGAAATGCCCAAGTTGATGATCAGGCTGAGGCTTTCATCAGAAGGTTCTATGAACAGCTGAGAATGCAAAGCCGAATGCAGTTGCTGGAGTACCAAGAGATGTGA 609 0.4351 MEAHSPVIAKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSSHHHHHHHHSKSLARGYGMQEYEFSCSNSPSPVFFHVPKKKHHFNFPCMNTTEVVEEPRPVVLVPNMTPEYTFNHRFDNASDFAPGERISPFTVRISNYSSEDEENEQEGGNGNAQVDDQAEAFIRRFYEQLRMQSRMQLLEYQEM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01367 202 Pfam Cotton fibre expressed protein 172 202 IPR008480 -
Gma16g01367 202 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 202 - -
Gma16g01367 202 PANTHER OS01G0930500 PROTEIN 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01367 Gma-Chr16 32636500 32637108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01367 - - gmx:100783425 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01367 16 32636500 32637108 Gma02g00612 02 6044160 6045485 GST
Gma19g01038 19 38092691 38093501 Gma16g01367 16 32636500 32637108 PCT
Gma16g00409 16 4361120 4362165 Gma16g01367 16 32636500 32637108 PCT
Gma16g01367 16 32636500 32637108 Gma19g01038 19 38092691 38093501 PCT
Gma16g01367 16 32636500 32637108 Gma16g00409 16 4361120 4362165 PCT