Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00409 ATGGAGGTACATTCTCCCGTTGTGGCCAAGAGATTATGGAATGTGTTGAGGGCAACCTTCTTCATGATAAGGAAGGGTTTGATCTCAAAGAGAAAGATGATCATGGACATGAATTTGATGATGAAGAAAGGGAAGGTGGTGAGAAAATCTCTTAGCAATCTCATGTCTTCACATCACCACCACCACAACCATAAGAGCGTGACACATGGCGGCGGCTTAGGGGTGCATTATGAATTCTCATGTAACAATAGTCCAAATCTAAATTTTTTCAACATGCCAAAGCGCAAGCACCATTTCAACTTCCCCTGCATCCATGCCCCAGAGGTTCTAGAGGAGGAATTAGAAGAACATGATTTTTCATTCGAAGTTGAAAGTGATGTTGTGCCTAATAAGGCTGTGGTCACCGTGCCCAAGACCCCAGAATACATGTACAACTTTTTTGTTGAGAAAAAGAGTCCTCTTCTCTCACCATTCTCTGTGAGGGTCTCCAATTACTCTGCATTGGATGAAAATGAAGACATTGGAAATGGCCATGTCGATGATCAGGCTGAGGATTTCATCAGAAGGTTCTATGAACAGCTTAGGACGCAAAGCCCCGTGCAATTCCTCCGTTACCAAGAGATGTAA 627 0.4338 MEVHSPVVAKRLWNVLRATFFMIRKGLISKRKMIMDMNLMMKKGKVVRKSLSNLMSSHHHHHNHKSVTHGGGLGVHYEFSCNNSPNLNFFNMPKRKHHFNFPCIHAPEVLEEELEEHDFSFEVESDVVPNKAVVTVPKTPEYMYNFFVEKKSPLLSPFSVRVSNYSALDENEDIGNGHVDDQAEDFIRRFYEQLRTQSPVQFLRYQEM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00409 208 Pfam Cotton fibre expressed protein 178 208 IPR008480 -
Gma16g00409 208 PANTHER OS01G0930500 PROTEIN 1 208 - -
Gma16g00409 208 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00409 Gma-Chr16 4361120 4362165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00409 - - gmx:100790324 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01038 19 38092691 38093501 Gma16g00409 16 4361120 4362165 GST
Gma16g00409 16 4361120 4362165 Gma16g01367 16 32636500 32637108 PCT
Gma16g00409 16 4361120 4362165 Gma02g00612 02 6044160 6045485 PCT
Gma16g01367 16 32636500 32637108 Gma16g00409 16 4361120 4362165 PCT
Gma02g00612 02 6044160 6045485 Gma16g00409 16 4361120 4362165 PCT